RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 CCDC27Q2M243 656 aa16.72■□□□□ 0.27
LRCH3-203ENST00000425562 ARHGEF28Q8N1W1 1705 aaKnown RBP16.72■□□□□ 0.27
LRCH3-203ENST00000425562 NOL8Q76FK4 1167 aaKnown RBP16.72■□□□□ 0.27
LRCH3-203ENST00000425562 JARID2Q92833 1246 aaPredicted RBP16.72■□□□□ 0.27
LRCH3-203ENST00000425562 PRPF40AO75400 957 aaKnown RBP16.71■□□□□ 0.27
LRCH3-203ENST00000425562 CYB5RLQ6IPT4 315 aa16.71■□□□□ 0.27
LRCH3-203ENST00000425562 MLH3Q9UHC1 1453 aa16.71■□□□□ 0.27
LRCH3-203ENST00000425562 DIAPH1O60610 1272 aaKnown RBP16.71■□□□□ 0.27
LRCH3-203ENST00000425562 CCDC173Q0VFZ6 552 aa16.71■□□□□ 0.27
LRCH3-203ENST00000425562 AAMPQ13685 434 aa16.71■□□□□ 0.27
LRCH3-203ENST00000425562 C16orf71Q8IYS4 520 aaPredicted RBP16.71■□□□□ 0.27
LRCH3-203ENST00000425562 RBSNQ9H1K0 784 aa16.71■□□□□ 0.27
LRCH3-203ENST00000425562 NEXMIFQ5QGS0 1516 aa16.71■□□□□ 0.27
LRCH3-203ENST00000425562 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.26
LRCH3-203ENST00000425562 MYO5BQ9ULV0 1848 aa16.7■□□□□ 0.26
LRCH3-203ENST00000425562 TPM2P07951 284 aa16.7■□□□□ 0.26
LRCH3-203ENST00000425562 SKOR2Q2VWA4 1001 aaPredicted RBP16.7■□□□□ 0.26
LRCH3-203ENST00000425562 SNX21Q969T3 373 aa16.7■□□□□ 0.26
LRCH3-203ENST00000425562 ZRANB1Q9UGI0 708 aa16.7■□□□□ 0.26
LRCH3-203ENST00000425562 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
LRCH3-203ENST00000425562 CALD1Q05682 793 aaKnown RBP16.7■□□□□ 0.26
LRCH3-203ENST00000425562 ZGPATQ8N5A5 531 aaKnown RBP16.7■□□□□ 0.26
LRCH3-203ENST00000425562 PRKAR2BP31323 418 aa16.69■□□□□ 0.26
LRCH3-203ENST00000425562 NCKAP5LQ9HCH0 1330 aa16.69■□□□□ 0.26
LRCH3-203ENST00000425562 PDCL3Q9H2J4 239 aa16.69■□□□□ 0.26
LRCH3-203ENST00000425562 TSPYL6Q8N831 410 aa16.68■□□□□ 0.26
LRCH3-203ENST00000425562 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
LRCH3-203ENST00000425562 PHACTR3Q96KR7 559 aa16.68■□□□□ 0.26
LRCH3-203ENST00000425562 ZSCAN23Q3MJ62 389 aa16.68■□□□□ 0.26
LRCH3-203ENST00000425562 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
LRCH3-203ENST00000425562 TSC1Q92574 1164 aa16.68■□□□□ 0.26
LRCH3-203ENST00000425562 OTUD7AQ8TE49 926 aaPredicted RBP16.67■□□□□ 0.26
LRCH3-203ENST00000425562 UQCRHLA0A096LP55 91 aa16.66■□□□□ 0.26
LRCH3-203ENST00000425562 UQCRHP07919 91 aa16.66■□□□□ 0.26
LRCH3-203ENST00000425562 CIZ1Q9ULV3 898 aaPredicted RBP16.66■□□□□ 0.26
LRCH3-203ENST00000425562 NSFL1CQ9UNZ2 370 aaKnown RBP16.66■□□□□ 0.26
LRCH3-203ENST00000425562 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
LRCH3-203ENST00000425562 OFD1O75665 1012 aa16.66■□□□□ 0.26
LRCH3-203ENST00000425562 BMP2KLQ5H9B9 411 aa16.66■□□□□ 0.26
LRCH3-203ENST00000425562 NCOA3Q9Y6Q9 1424 aa16.66■□□□□ 0.26
LRCH3-203ENST00000425562 SYCE3A1L190 88 aa16.65■□□□□ 0.26
LRCH3-203ENST00000425562 PIK3C2BO00750 1634 aa16.65■□□□□ 0.26
LRCH3-203ENST00000425562 FAM177BA6PVY3 158 aa16.65■□□□□ 0.26
LRCH3-203ENST00000425562 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
LRCH3-203ENST00000425562 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
LRCH3-203ENST00000425562 SIRT2Q8IXJ6 389 aa16.65■□□□□ 0.26
LRCH3-203ENST00000425562 ISY1Q9ULR0 285 aaKnown RBP16.65■□□□□ 0.26
LRCH3-203ENST00000425562 NSD2O96028 1365 aa16.64■□□□□ 0.25
LRCH3-203ENST00000425562 SMARCA5O60264 1052 aaPredicted RBP16.64■□□□□ 0.25
LRCH3-203ENST00000425562 SLC52A1Q9NWF4 448 aa16.64■□□□□ 0.25
LRCH3-203ENST00000425562 NUTM2FA1L443 756 aa16.64■□□□□ 0.25
LRCH3-203ENST00000425562 GSPT1P15170 499 aaKnown RBP16.64■□□□□ 0.25
LRCH3-203ENST00000425562 PPP1R9BQ96SB3 815 aa16.64■□□□□ 0.25
LRCH3-203ENST00000425562 YTHDC2Q9H6S0 1430 aaKnown RBP16.63■□□□□ 0.25
LRCH3-203ENST00000425562 DCTN1Q14203 1278 aa16.63■□□□□ 0.25
LRCH3-203ENST00000425562 RRS1Q15050 365 aaKnown RBP16.63■□□□□ 0.25
LRCH3-203ENST00000425562 NME9Q86XW9 330 aa16.63■□□□□ 0.25
LRCH3-203ENST00000425562 DTNBO60941 627 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.62■□□□□ 0.25
LRCH3-203ENST00000425562 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 CD163L1Q9NR16 1453 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 DIP2CQ9Y2E4 1556 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 FAM83GA6ND36 823 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 SOX12O15370 315 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 GPT2Q8TD30 523 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 LMBRD1Q9NUN5 540 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 ZHX1Q9UKY1 873 aaPredicted RBP16.62■□□□□ 0.25
LRCH3-203ENST00000425562 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 PTPRMP28827 1452 aa16.62■□□□□ 0.25
LRCH3-203ENST00000425562 ZBTB7BO15156 539 aaPredicted RBP16.61■□□□□ 0.25
LRCH3-203ENST00000425562 ZMYM3Q14202 1370 aa16.61■□□□□ 0.25
LRCH3-203ENST00000425562 USP32Q8NFA0 1604 aa16.61■□□□□ 0.25
LRCH3-203ENST00000425562 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
LRCH3-203ENST00000425562 ZNF830Q96NB3 372 aaPredicted RBP16.61■□□□□ 0.25
LRCH3-203ENST00000425562 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
LRCH3-203ENST00000425562 PTMAP06454 111 aaKnown RBP16.61■□□□□ 0.25
LRCH3-203ENST00000425562 DNTTIP2Q5QJE6 756 aaKnown RBP16.61■□□□□ 0.25
LRCH3-203ENST00000425562 COL3A1P02461 1466 aaPredicted RBP16.6■□□□□ 0.25
LRCH3-203ENST00000425562 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
LRCH3-203ENST00000425562 CDC45O75419 566 aa16.6■□□□□ 0.25
LRCH3-203ENST00000425562 ADGRB2O60241 1585 aa16.6■□□□□ 0.25
LRCH3-203ENST00000425562 TSHZ3Q63HK5 1081 aa16.59■□□□□ 0.25
LRCH3-203ENST00000425562 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
LRCH3-203ENST00000425562 A0A0U1RQG5 324 aaPredicted RBP16.59■□□□□ 0.25
LRCH3-203ENST00000425562 C17orf53Q8N3J3 647 aaPredicted RBP16.59■□□□□ 0.25
LRCH3-203ENST00000425562 PUS7Q96PZ0 661 aaKnown RBP16.59■□□□□ 0.25
LRCH3-203ENST00000425562 TMEM63CQ9P1W3 806 aa16.59■□□□□ 0.25
LRCH3-203ENST00000425562 CFAP74Q9C0B2 1584 aa16.57■□□□□ 0.24
LRCH3-203ENST00000425562 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
LRCH3-203ENST00000425562 FAM69CQ0P6D2 419 aa16.56■□□□□ 0.24
LRCH3-203ENST00000425562 KRT24Q2M2I5 525 aa16.56■□□□□ 0.24
LRCH3-203ENST00000425562 FCHSD2O94868 740 aa16.56■□□□□ 0.24
LRCH3-203ENST00000425562 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
LRCH3-203ENST00000425562 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
LRCH3-203ENST00000425562 CT47B1P0C2W7 299 aaPredicted RBP16.55■□□□□ 0.24
LRCH3-203ENST00000425562 ZDHHC9Q9Y397 364 aa16.55■□□□□ 0.24
LRCH3-203ENST00000425562 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
LRCH3-203ENST00000425562 MBIPQ9NS73 344 aa16.55■□□□□ 0.24
LRCH3-203ENST00000425562 NOL7Q9UMY1 257 aaKnown RBP16.55■□□□□ 0.24
LRCH3-203ENST00000425562 GCC1Q96CN9 775 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms