RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 NLRP2Q9NX02 1062 aa22.75■■□□□ 1.23
GAREM2-201ENST00000401533 ANKRD36BQ8N2N9 1353 aa22.75■■□□□ 1.23
GAREM2-201ENST00000401533 MAP4K4O95819 1239 aaPredicted RBP22.75■■□□□ 1.23
GAREM2-201ENST00000401533 POLR3AO14802 1390 aaPredicted RBP22.75■■□□□ 1.23
GAREM2-201ENST00000401533 IL1RAPL2Q9NP60 686 aa22.75■■□□□ 1.23
GAREM2-201ENST00000401533 EFCAB6Q5THR3 1501 aa22.74■■□□□ 1.23
GAREM2-201ENST00000401533 NEK4P51957 841 aa22.73■■□□□ 1.23
GAREM2-201ENST00000401533 GAS2L2Q8NHY3 880 aa22.73■■□□□ 1.23
GAREM2-201ENST00000401533 A0A1W2PP64 1363 aa22.73■■□□□ 1.23
GAREM2-201ENST00000401533 PIK3C2GO75747 1445 aa22.73■■□□□ 1.23
GAREM2-201ENST00000401533 MLH3Q9UHC1 1453 aa22.72■■□□□ 1.23
GAREM2-201ENST00000401533 DIAPH3Q9NSV4 1193 aa22.72■■□□□ 1.23
GAREM2-201ENST00000401533 DEPDC5O75140 1603 aa22.72■■□□□ 1.23
GAREM2-201ENST00000401533 AMOTL2Q9Y2J4 779 aa22.71■■□□□ 1.23
GAREM2-201ENST00000401533 CCDC30Q5VVM6 783 aa22.71■■□□□ 1.23
GAREM2-201ENST00000401533 C8orf58Q8NAV2 365 aa22.71■■□□□ 1.23
GAREM2-201ENST00000401533 KIDINS220Q9ULH0 1771 aa22.71■■□□□ 1.23
GAREM2-201ENST00000401533 GPATCH3Q96I76 525 aa22.71■■□□□ 1.23
GAREM2-201ENST00000401533 VWDEQ8N2E2 1590 aa22.7■■□□□ 1.22
GAREM2-201ENST00000401533 ZRSR1Q15695 479 aaKnown RBP22.7■■□□□ 1.22
GAREM2-201ENST00000401533 MYOM2P54296 1465 aa22.7■■□□□ 1.22
GAREM2-201ENST00000401533 CEP152O94986 1710 aa22.69■■□□□ 1.22
GAREM2-201ENST00000401533 GORABQ5T7V8 394 aa22.69■■□□□ 1.22
GAREM2-201ENST00000401533 GNAI2P04899 355 aa22.69■■□□□ 1.22
GAREM2-201ENST00000401533 THEMISQ8N1K5 641 aaPredicted RBP22.69■■□□□ 1.22
GAREM2-201ENST00000401533 RNF17Q9BXT8 1623 aaKnown RBP22.69■■□□□ 1.22
GAREM2-201ENST00000401533 BLMP54132 1417 aaPredicted RBP22.69■■□□□ 1.22
GAREM2-201ENST00000401533 IFT57Q9NWB7 429 aa22.68■■□□□ 1.22
GAREM2-201ENST00000401533 IFIT2P09913 472 aaKnown RBP22.68■■□□□ 1.22
GAREM2-201ENST00000401533 TSHZ3Q63HK5 1081 aa22.68■■□□□ 1.22
GAREM2-201ENST00000401533 ACEP12821 1306 aa22.68■■□□□ 1.22
GAREM2-201ENST00000401533 CHMP4AQ9BY43 222 aa22.67■■□□□ 1.22
GAREM2-201ENST00000401533 ERVK-7P63135 1459 aa22.67■■□□□ 1.22
GAREM2-201ENST00000401533 MCM4P33991 863 aa22.67■■□□□ 1.22
GAREM2-201ENST00000401533 GNAI3P08754 354 aa22.66■■□□□ 1.22
GAREM2-201ENST00000401533 HSP90B1P14625 803 aaKnown RBP22.66■■□□□ 1.22
GAREM2-201ENST00000401533 ALDH1L2Q3SY69 923 aa22.66■■□□□ 1.22
GAREM2-201ENST00000401533 PPRC1Q5VV67 1664 aaKnown RBP22.66■■□□□ 1.22
GAREM2-201ENST00000401533 ZNF530Q6P9A1 599 aaPredicted RBP22.65■■□□□ 1.22
GAREM2-201ENST00000401533 MROH1Q8NDA8 1641 aa22.65■■□□□ 1.22
GAREM2-201ENST00000401533 MAP3K4Q9Y6R4 1608 aa22.65■■□□□ 1.22
GAREM2-201ENST00000401533 KDM2BQ8NHM5 1336 aa22.65■■□□□ 1.22
GAREM2-201ENST00000401533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.65■■□□□ 1.22
GAREM2-201ENST00000401533 NEO1Q92859 1461 aa22.65■■□□□ 1.22
GAREM2-201ENST00000401533 RAPGEF4Q8WZA2 1011 aa22.64■■□□□ 1.22
GAREM2-201ENST00000401533 ABCC11Q96J66 1382 aa22.64■■□□□ 1.22
GAREM2-201ENST00000401533 TTC5Q8N0Z6 440 aa22.64■■□□□ 1.21
GAREM2-201ENST00000401533 HECW2Q9P2P5 1572 aa22.64■■□□□ 1.21
GAREM2-201ENST00000401533 ZC3H6P61129 1189 aaKnown RBP22.64■■□□□ 1.21
GAREM2-201ENST00000401533 NEXNQ0ZGT2 675 aa22.64■■□□□ 1.21
GAREM2-201ENST00000401533 TAF7LQ5H9L4 462 aa22.64■■□□□ 1.21
GAREM2-201ENST00000401533 KIF1BO60333 1816 aa22.63■■□□□ 1.21
GAREM2-201ENST00000401533 NPC1L1Q9UHC9 1359 aa22.63■■□□□ 1.21
GAREM2-201ENST00000401533 RIC3Q7Z5B4 369 aa22.63■■□□□ 1.21
GAREM2-201ENST00000401533 SYNMO15061 1565 aa22.63■■□□□ 1.21
GAREM2-201ENST00000401533 FOXO3O43524 673 aa22.63■■□□□ 1.21
GAREM2-201ENST00000401533 TBC1D32Q96NH3 1257 aa22.63■■□□□ 1.21
GAREM2-201ENST00000401533 PTMSP20962 102 aa22.63■■□□□ 1.21
GAREM2-201ENST00000401533 CFAP74Q9C0B2 1584 aa22.63■■□□□ 1.21
GAREM2-201ENST00000401533 IQGAP1P46940 1657 aa22.63■■□□□ 1.21
GAREM2-201ENST00000401533 YEATS2Q9ULM3 1422 aa22.62■■□□□ 1.21
GAREM2-201ENST00000401533 RNF214Q8ND24 703 aa22.62■■□□□ 1.21
GAREM2-201ENST00000401533 TRIM35Q9UPQ4 493 aa22.62■■□□□ 1.21
GAREM2-201ENST00000401533 NSD2O96028 1365 aa22.62■■□□□ 1.21
GAREM2-201ENST00000401533 ANXA1P04083 346 aa22.62■■□□□ 1.21
GAREM2-201ENST00000401533 CAVIN1Q6NZI2 390 aaKnown RBP22.62■■□□□ 1.21
GAREM2-201ENST00000401533 C16orf71Q8IYS4 520 aaPredicted RBP22.62■■□□□ 1.21
GAREM2-201ENST00000401533 INSRP06213 1382 aa22.61■■□□□ 1.21
GAREM2-201ENST00000401533 CCDC27Q2M243 656 aa22.61■■□□□ 1.21
GAREM2-201ENST00000401533 DRC7Q8IY82 874 aa22.61■■□□□ 1.21
GAREM2-201ENST00000401533 G3BP1Q13283 466 aaKnown RBP eCLIP22.61■■□□□ 1.21
GAREM2-201ENST00000401533 SIL1Q9H173 461 aa22.61■■□□□ 1.21
GAREM2-201ENST00000401533 GLIPR1L2Q4G1C9 344 aa22.61■■□□□ 1.21
GAREM2-201ENST00000401533 ABCA6Q8N139 1617 aa22.61■■□□□ 1.21
GAREM2-201ENST00000401533 HDAC5Q9UQL6 1122 aa22.6■■□□□ 1.21
GAREM2-201ENST00000401533 K7ELQ4 463 aaPredicted RBP22.6■■□□□ 1.21
GAREM2-201ENST00000401533 PRPF40AO75400 957 aaKnown RBP22.6■■□□□ 1.21
GAREM2-201ENST00000401533 NUTM1Q86Y26 1132 aa22.6■■□□□ 1.21
GAREM2-201ENST00000401533 RBM42Q9BTD8 480 aaKnown RBP22.6■■□□□ 1.21
GAREM2-201ENST00000401533 LMTK2Q8IWU2 1503 aa22.6■■□□□ 1.21
GAREM2-201ENST00000401533 SKOR2Q2VWA4 1001 aaPredicted RBP22.6■■□□□ 1.21
GAREM2-201ENST00000401533 PROSER2Q86WR7 435 aaPredicted RBP22.6■■□□□ 1.21
GAREM2-201ENST00000401533 MEIS3Q99687 375 aa22.6■■□□□ 1.21
GAREM2-201ENST00000401533 NPHP1O15259 732 aa22.59■■□□□ 1.21
GAREM2-201ENST00000401533 SRGAP3O43295 1099 aa22.59■■□□□ 1.21
GAREM2-201ENST00000401533 VAMP4O75379 141 aa22.59■■□□□ 1.21
GAREM2-201ENST00000401533 LRRCC1Q9C099 1032 aa22.59■■□□□ 1.21
GAREM2-201ENST00000401533 ABCC3O15438 1527 aa22.59■■□□□ 1.21
GAREM2-201ENST00000401533 ZMYM4Q5VZL5 1548 aa22.59■■□□□ 1.21
GAREM2-201ENST00000401533 TBC1D9Q6ZT07 1266 aa22.59■■□□□ 1.21
GAREM2-201ENST00000401533 VPS37CA5D8V6 355 aaPredicted RBP22.59■■□□□ 1.21
GAREM2-201ENST00000401533 CCT4P50991 539 aaKnown RBP22.59■■□□□ 1.21
GAREM2-201ENST00000401533 UPF3BQ9BZI7 483 aaKnown RBP22.59■■□□□ 1.21
GAREM2-201ENST00000401533 NUCB2P80303 420 aa22.58■■□□□ 1.2
GAREM2-201ENST00000401533 RPAP2Q8IXW5 612 aaPredicted RBP22.58■■□□□ 1.2
GAREM2-201ENST00000401533 KDM5AP29375 1690 aaKnown RBP22.58■■□□□ 1.2
GAREM2-201ENST00000401533 MYL6BP14649 208 aa22.57■■□□□ 1.2
GAREM2-201ENST00000401533 EIF4A2Q14240 407 aaKnown RBP22.57■■□□□ 1.2
GAREM2-201ENST00000401533 SRCIN1Q9C0H9 1055 aa22.57■■□□□ 1.2
GAREM2-201ENST00000401533 FOSBP53539 338 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms