RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PIK3R4Q99570 1358 aa13.57□□□□□ -0.24
POLR2J3-201ENST00000379340 ADAMTS2O95450 1211 aa13.57□□□□□ -0.24
POLR2J3-201ENST00000379340 NEUROD2Q15784 382 aa13.57□□□□□ -0.24
POLR2J3-201ENST00000379340 COG3Q96JB2 828 aa13.57□□□□□ -0.24
POLR2J3-201ENST00000379340 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
POLR2J3-201ENST00000379340 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
POLR2J3-201ENST00000379340 PRR36Q9H6K5 1346 aa13.56□□□□□ -0.24
POLR2J3-201ENST00000379340 PLEKHG3A1L390 1219 aa13.56□□□□□ -0.24
POLR2J3-201ENST00000379340 NEFMP07197 916 aa13.56□□□□□ -0.24
POLR2J3-201ENST00000379340 MS4A1P11836 297 aa13.56□□□□□ -0.24
POLR2J3-201ENST00000379340 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-201ENST00000379340 AAMPQ13685 434 aa13.56□□□□□ -0.24
POLR2J3-201ENST00000379340 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
POLR2J3-201ENST00000379340 CENPQQ7L2Z9 268 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-201ENST00000379340 LRRC59Q96AG4 307 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-201ENST00000379340 NALCNQ8IZF0 1738 aa13.55□□□□□ -0.24
POLR2J3-201ENST00000379340 DCCP43146 1447 aa13.54□□□□□ -0.24
POLR2J3-201ENST00000379340 NME9Q86XW9 330 aa13.54□□□□□ -0.24
POLR2J3-201ENST00000379340 NGLY1Q96IV0 654 aa13.54□□□□□ -0.24
POLR2J3-201ENST00000379340 KDM2BQ8NHM5 1336 aa13.53□□□□□ -0.24
POLR2J3-201ENST00000379340 BCAR3O75815 825 aa13.53□□□□□ -0.24
POLR2J3-201ENST00000379340 RARSP54136 660 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-201ENST00000379340 USP6P35125 1406 aa13.52□□□□□ -0.24
POLR2J3-201ENST00000379340 ANKARQ7Z5J8 1434 aa13.52□□□□□ -0.24
POLR2J3-201ENST00000379340 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.25
POLR2J3-201ENST00000379340 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
POLR2J3-201ENST00000379340 OVOS2A0A0J9YW53 1432 aa13.52□□□□□ -0.25
POLR2J3-201ENST00000379340 OVOS2Q6IE36 1432 aa13.52□□□□□ -0.25
POLR2J3-201ENST00000379340 TTC21BQ7Z4L5 1316 aa13.52□□□□□ -0.25
POLR2J3-201ENST00000379340 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
POLR2J3-201ENST00000379340 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
POLR2J3-201ENST00000379340 TTC21AQ8NDW8 1320 aa13.51□□□□□ -0.25
POLR2J3-201ENST00000379340 IL13P35225 146 aa13.5□□□□□ -0.25
POLR2J3-201ENST00000379340 RIPK4P57078 832 aa13.5□□□□□ -0.25
POLR2J3-201ENST00000379340 CALD1Q05682 793 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-201ENST00000379340 USP21Q9UK80 565 aa13.5□□□□□ -0.25
POLR2J3-201ENST00000379340 ACEP12821 1306 aa13.5□□□□□ -0.25
POLR2J3-201ENST00000379340 SSH2Q76I76 1423 aa13.49□□□□□ -0.25
POLR2J3-201ENST00000379340 FMN2Q9NZ56 1722 aa13.49□□□□□ -0.25
POLR2J3-201ENST00000379340 USP31Q70CQ4 1352 aa13.49□□□□□ -0.25
POLR2J3-201ENST00000379340 ADGRL3Q9HAR2 1447 aa13.49□□□□□ -0.25
POLR2J3-201ENST00000379340 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
POLR2J3-201ENST00000379340 ATRNO75882 1429 aa13.48□□□□□ -0.25
POLR2J3-201ENST00000379340 PPM1GO15355 546 aaPredicted RBP13.48□□□□□ -0.25
POLR2J3-201ENST00000379340 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
POLR2J3-201ENST00000379340 NFE2L2Q16236 605 aa13.48□□□□□ -0.25
POLR2J3-201ENST00000379340 USP54Q70EL1 1684 aa13.48□□□□□ -0.25
POLR2J3-201ENST00000379340 LMOD3Q0VAK6 560 aa13.47□□□□□ -0.25
POLR2J3-201ENST00000379340 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
POLR2J3-201ENST00000379340 ORAI2Q96SN7 254 aa13.47□□□□□ -0.25
POLR2J3-201ENST00000379340 TRPC5Q9UL62 973 aaPredicted RBP13.47□□□□□ -0.25
POLR2J3-201ENST00000379340 C1orf167Q5SNV9 1468 aa13.47□□□□□ -0.25
POLR2J3-201ENST00000379340 MYT1Q01538 1121 aa13.46□□□□□ -0.25
POLR2J3-201ENST00000379340 FNBP4Q8N3X1 1017 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-201ENST00000379340 CLUAP1Q96AJ1 413 aa13.45□□□□□ -0.26
POLR2J3-201ENST00000379340 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-201ENST00000379340 ZKSCAN2Q63HK3 967 aa13.45□□□□□ -0.26
POLR2J3-201ENST00000379340 FRAT1Q92837 279 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-201ENST00000379340 SOS2Q07890 1332 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-201ENST00000379340 EP400Q96L91 3159 aa13.44□□□□□ -0.26
POLR2J3-201ENST00000379340 DLG5Q8TDM6 1919 aa13.44□□□□□ -0.26
POLR2J3-201ENST00000379340 RGPD1P0DJD0 1748 aa13.44□□□□□ -0.26
POLR2J3-201ENST00000379340 ANP32AP39687 249 aaKnown RBP13.44□□□□□ -0.26
POLR2J3-201ENST00000379340 EXOSC9Q06265 439 aaKnown RBP13.44□□□□□ -0.26
POLR2J3-201ENST00000379340 ALDH1L2Q3SY69 923 aa13.44□□□□□ -0.26
POLR2J3-201ENST00000379340 BCL9LQ86UU0 1499 aa13.44□□□□□ -0.26
POLR2J3-201ENST00000379340 PDE4AP27815 886 aa13.43□□□□□ -0.26
POLR2J3-201ENST00000379340 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
POLR2J3-201ENST00000379340 TSR2Q969E8 191 aaKnown RBP13.43□□□□□ -0.26
POLR2J3-201ENST00000379340 BACH2Q9BYV9 841 aa13.43□□□□□ -0.26
POLR2J3-201ENST00000379340 PEAK1Q9H792 1746 aa13.43□□□□□ -0.26
POLR2J3-201ENST00000379340 FBLN1P23142 703 aa13.42□□□□□ -0.26
POLR2J3-201ENST00000379340 GNAI1P63096 354 aa13.42□□□□□ -0.26
POLR2J3-201ENST00000379340 RRS1Q15050 365 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-201ENST00000379340 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
POLR2J3-201ENST00000379340 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
POLR2J3-201ENST00000379340 COG6Q9Y2V7 657 aa13.42□□□□□ -0.26
POLR2J3-201ENST00000379340 KIF16BQ96L93 1317 aa13.42□□□□□ -0.26
POLR2J3-201ENST00000379340 PIK3C2AO00443 1686 aa13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 KIF24Q5T7B8 1368 aa13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 HMOX1P09601 288 aa13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 DEFB132Q7Z7B7 95 aa13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 NGDNQ8NEJ9 315 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 ANP32EQ9BTT0 268 aa13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 ARHGEF10O15013 1369 aa13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 BRPF1P55201 1214 aaPredicted RBP13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 DZIP1LQ8IYY4 767 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-201ENST00000379340 COL22A1Q8NFW1 1626 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-201ENST00000379340 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
POLR2J3-201ENST00000379340 IPO8O15397 1037 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-201ENST00000379340 EIF4A2Q14240 407 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-201ENST00000379340 MVPQ14764 893 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-201ENST00000379340 PHACTR3Q96KR7 559 aa13.4□□□□□ -0.26
POLR2J3-201ENST00000379340 FLT4P35916 1363 aa13.39□□□□□ -0.27
POLR2J3-201ENST00000379340 NUTM2FA1L443 756 aa13.39□□□□□ -0.27
POLR2J3-201ENST00000379340 MSH5O43196 834 aa13.39□□□□□ -0.27
POLR2J3-201ENST00000379340 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-201ENST00000379340 ZNF853P0CG23 659 aa13.38□□□□□ -0.27
POLR2J3-201ENST00000379340 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 323.9 ms