RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 ERC2O15083 957 aa12.95□□□□□ -0.34
PGK1-201ENST00000373316 XPCQ01831 940 aaPredicted RBP12.95□□□□□ -0.34
PGK1-201ENST00000373316 C1orf141Q5JVX7 400 aa12.95□□□□□ -0.34
PGK1-201ENST00000373316 ANKRD45Q5TZF3 282 aa12.95□□□□□ -0.34
PGK1-201ENST00000373316 INSRP06213 1382 aa12.95□□□□□ -0.34
PGK1-201ENST00000373316 RRS1Q15050 365 aaKnown RBP12.95□□□□□ -0.34
PGK1-201ENST00000373316 NUDT16Q96DE0 195 aaKnown RBP12.95□□□□□ -0.34
PGK1-201ENST00000373316 PRR36Q9H6K5 1346 aa12.95□□□□□ -0.34
PGK1-201ENST00000373316 FER1L4A9Z1Z3 1794 aa12.95□□□□□ -0.34
PGK1-201ENST00000373316 FYB1O15117 783 aa12.94□□□□□ -0.34
PGK1-201ENST00000373316 ZKSCAN1P17029 563 aaPredicted RBP12.94□□□□□ -0.34
PGK1-201ENST00000373316 NEXNQ0ZGT2 675 aa12.94□□□□□ -0.34
PGK1-201ENST00000373316 RIMS1Q86UR5 1692 aaKnown RBP12.94□□□□□ -0.34
PGK1-201ENST00000373316 HIP1O00291 1037 aa12.94□□□□□ -0.34
PGK1-201ENST00000373316 MTERF4Q7Z6M4 381 aaKnown RBP12.94□□□□□ -0.34
PGK1-201ENST00000373316 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
PGK1-201ENST00000373316 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
PGK1-201ENST00000373316 KIAA1210Q9ULL0 1709 aa12.94□□□□□ -0.34
PGK1-201ENST00000373316 GAS2L2Q8NHY3 880 aa12.94□□□□□ -0.34
PGK1-201ENST00000373316 PTPRUQ92729 1446 aa12.94□□□□□ -0.34
PGK1-201ENST00000373316 WASLO00401 505 aaPredicted RBP12.94□□□□□ -0.34
PGK1-201ENST00000373316 GNAI3P08754 354 aa12.93□□□□□ -0.34
PGK1-201ENST00000373316 THEMISQ8N1K5 641 aaPredicted RBP12.93□□□□□ -0.34
PGK1-201ENST00000373316 SPINK5Q9NQ38 1064 aaPredicted RBP12.93□□□□□ -0.34
PGK1-201ENST00000373316 SETBP1Q9Y6X0 1596 aa12.93□□□□□ -0.34
PGK1-201ENST00000373316 MRE11P49959 708 aa12.93□□□□□ -0.34
PGK1-201ENST00000373316 ADAMTS13Q76LX8 1427 aa12.92□□□□□ -0.34
PGK1-201ENST00000373316 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
PGK1-201ENST00000373316 CPLX2Q6PUV4 134 aaKnown RBP12.92□□□□□ -0.34
PGK1-201ENST00000373316 C22orf23Q9BZE7 217 aa12.92□□□□□ -0.34
PGK1-201ENST00000373316 NAP1L2Q9ULW6 460 aaPredicted RBP12.92□□□□□ -0.34
PGK1-201ENST00000373316 NRXN3Q9Y4C0 1643 aa12.92□□□□□ -0.34
PGK1-201ENST00000373316 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
PGK1-201ENST00000373316 GORABQ5T7V8 394 aa12.91□□□□□ -0.34
PGK1-201ENST00000373316 EMILIN1Q9Y6C2 1016 aa12.91□□□□□ -0.34
PGK1-201ENST00000373316 DDX49Q9Y6V7 483 aaKnown RBP12.91□□□□□ -0.34
PGK1-201ENST00000373316 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
PGK1-201ENST00000373316 MBD3O95983 291 aa12.91□□□□□ -0.34
PGK1-201ENST00000373316 RABEP1Q15276 862 aa12.91□□□□□ -0.34
PGK1-201ENST00000373316 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.91□□□□□ -0.34
PGK1-201ENST00000373316 PUS7Q96PZ0 661 aaKnown RBP12.91□□□□□ -0.34
PGK1-201ENST00000373316 NEURL4Q96JN8 1562 aa12.91□□□□□ -0.34
PGK1-201ENST00000373316 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
PGK1-201ENST00000373316 DIAPH3Q9NSV4 1193 aa12.91□□□□□ -0.34
PGK1-201ENST00000373316 LRPPRCP42704 1394 aaKnown RBP12.91□□□□□ -0.34
PGK1-201ENST00000373316 MAP7D2Q96T17 732 aa12.9□□□□□ -0.34
PGK1-201ENST00000373316 HMOX1P09601 288 aa12.9□□□□□ -0.34
PGK1-201ENST00000373316 TEFQ10587 303 aa12.9□□□□□ -0.34
PGK1-201ENST00000373316 HOOK1Q9UJC3 728 aaKnown RBP12.89□□□□□ -0.35
PGK1-201ENST00000373316 HSP90B1P14625 803 aaKnown RBP12.89□□□□□ -0.35
PGK1-201ENST00000373316 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
PGK1-201ENST00000373316 PPIP5K1Q6PFW1 1433 aa12.89□□□□□ -0.35
PGK1-201ENST00000373316 TAF7LQ5H9L4 462 aa12.89□□□□□ -0.35
PGK1-201ENST00000373316 SLC4A10Q6U841 1118 aa12.89□□□□□ -0.35
PGK1-201ENST00000373316 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
PGK1-201ENST00000373316 ANO8Q9HCE9 1232 aaPredicted RBP12.88□□□□□ -0.35
PGK1-201ENST00000373316 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
PGK1-201ENST00000373316 ANKRD36BQ8N2N9 1353 aa12.88□□□□□ -0.35
PGK1-201ENST00000373316 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
PGK1-201ENST00000373316 PSMA5P28066 241 aa12.88□□□□□ -0.35
PGK1-201ENST00000373316 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
PGK1-201ENST00000373316 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
PGK1-201ENST00000373316 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
PGK1-201ENST00000373316 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
PGK1-201ENST00000373316 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
PGK1-201ENST00000373316 NPHP1O15259 732 aa12.87□□□□□ -0.35
PGK1-201ENST00000373316 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
PGK1-201ENST00000373316 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
PGK1-201ENST00000373316 ACEP12821 1306 aa12.86□□□□□ -0.35
PGK1-201ENST00000373316 FCHSD2O94868 740 aa12.86□□□□□ -0.35
PGK1-201ENST00000373316 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
PGK1-201ENST00000373316 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
PGK1-201ENST00000373316 ANKLE2Q86XL3 938 aa12.86□□□□□ -0.35
PGK1-201ENST00000373316 MYO3AQ8NEV4 1616 aa12.86□□□□□ -0.35
PGK1-201ENST00000373316 FAM184AQ8NB25 1140 aa12.85□□□□□ -0.35
PGK1-201ENST00000373316 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
PGK1-201ENST00000373316 A0A0G2JS52 829 aa12.85□□□□□ -0.35
PGK1-201ENST00000373316 H3BQV1 296 aa12.85□□□□□ -0.35
PGK1-201ENST00000373316 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
PGK1-201ENST00000373316 GOLGA6L19H0YKK7 550 aa12.85□□□□□ -0.35
PGK1-201ENST00000373316 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
PGK1-201ENST00000373316 IFIT2P09913 472 aaKnown RBP12.84□□□□□ -0.35
PGK1-201ENST00000373316 BCL2L13Q9BXK5 485 aa12.84□□□□□ -0.35
PGK1-201ENST00000373316 SLFN5Q08AF3 891 aa12.84□□□□□ -0.35
PGK1-201ENST00000373316 CCDC39Q9UFE4 941 aa12.84□□□□□ -0.35
PGK1-201ENST00000373316 IL16Q14005 1332 aa12.84□□□□□ -0.35
PGK1-201ENST00000373316 APBB1O00213 710 aa12.84□□□□□ -0.35
PGK1-201ENST00000373316 PDCP20941 246 aa12.84□□□□□ -0.35
PGK1-201ENST00000373316 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
PGK1-201ENST00000373316 TPM1P09493 284 aa12.84□□□□□ -0.35
PGK1-201ENST00000373316 TMX4Q9H1E5 349 aaPredicted RBP12.84□□□□□ -0.35
PGK1-201ENST00000373316 SYNE3Q6ZMZ3 975 aa12.83□□□□□ -0.35
PGK1-201ENST00000373316 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.35
PGK1-201ENST00000373316 G3BP1Q13283 466 aaKnown RBP eCLIP12.83□□□□□ -0.363e-13■■■□□ 17
PGK1-201ENST00000373316 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
PGK1-201ENST00000373316 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.36
PGK1-201ENST00000373316 GZF1Q9H116 711 aaPredicted RBP12.83□□□□□ -0.36
PGK1-201ENST00000373316 SETD1AO15047 1707 aaKnown RBP12.83□□□□□ -0.36
PGK1-201ENST00000373316 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
PGK1-201ENST00000373316 SF3A1Q15459 793 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms