RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 BRINP3Q76B58 766 aa34.13■■■■□ 3.05
PHOX2A-201ENST00000298231 TRIM35Q9UPQ4 493 aa34.12■■■■□ 3.05
PHOX2A-201ENST00000298231 TTC21BQ7Z4L5 1316 aa34.11■■■■□ 3.05
PHOX2A-201ENST00000298231 SSH2Q76I76 1423 aa34.11■■■■□ 3.05
PHOX2A-201ENST00000298231 CANXP27824 592 aaKnown RBP34.09■■■■□ 3.05
PHOX2A-201ENST00000298231 AHDC1Q5TGY3 1603 aaPredicted RBP34.09■■■■□ 3.05
PHOX2A-201ENST00000298231 ACEP12821 1306 aa34.09■■■■□ 3.05
PHOX2A-201ENST00000298231 IL13P35225 146 aa34.09■■■■□ 3.05
PHOX2A-201ENST00000298231 TTC21AQ8NDW8 1320 aa34.08■■■■□ 3.05
PHOX2A-201ENST00000298231 EMILIN1Q9Y6C2 1016 aa34.07■■■■□ 3.04
PHOX2A-201ENST00000298231 USP31Q70CQ4 1352 aa34.06■■■■□ 3.04
PHOX2A-201ENST00000298231 RIPK4P57078 832 aa34.06■■■■□ 3.04
PHOX2A-201ENST00000298231 PRKAR2BP31323 418 aa34.05■■■■□ 3.04
PHOX2A-201ENST00000298231 NHSL1Q5SYE7 1610 aa34.04■■■■□ 3.04
PHOX2A-201ENST00000298231 PPM1GO15355 546 aaPredicted RBP34.04■■■■□ 3.04
PHOX2A-201ENST00000298231 CALD1Q05682 793 aaKnown RBP34.04■■■■□ 3.04
PHOX2A-201ENST00000298231 PHLPP1O60346 1717 aa34.03■■■■□ 3.04
PHOX2A-201ENST00000298231 ORAI2Q96SN7 254 aa34.03■■■■□ 3.04
PHOX2A-201ENST00000298231 USP54Q70EL1 1684 aa34.02■■■■□ 3.04
PHOX2A-201ENST00000298231 NUTM2FA1L443 756 aa34.01■■■■□ 3.04
PHOX2A-201ENST00000298231 NFE2L2Q16236 605 aa34.01■■■■□ 3.04
PHOX2A-201ENST00000298231 ZRANB1Q9UGI0 708 aa34■■■■□ 3.03
PHOX2A-201ENST00000298231 COL16A1Q07092 1604 aaPredicted RBP34■■■■□ 3.03
PHOX2A-201ENST00000298231 LMOD3Q0VAK6 560 aa33.98■■■■□ 3.03
PHOX2A-201ENST00000298231 ESCO1Q5FWF5 840 aa33.98■■■■□ 3.03
PHOX2A-201ENST00000298231 RGPD8O14715 1765 aaPredicted RBP33.98■■■■□ 3.03
PHOX2A-201ENST00000298231 KIF1AQ12756 1690 aa33.97■■■■□ 3.03
PHOX2A-201ENST00000298231 CLUAP1Q96AJ1 413 aa33.96■■■■□ 3.03
PHOX2A-201ENST00000298231 ZNF428Q96B54 188 aa33.96■■■■□ 3.03
PHOX2A-201ENST00000298231 RGPD1P0DJD0 1748 aa33.95■■■■□ 3.03
PHOX2A-201ENST00000298231 FBLN1P23142 703 aa33.93■■■■□ 3.02
PHOX2A-201ENST00000298231 FRAT1Q92837 279 aaPredicted RBP33.93■■■■□ 3.02
PHOX2A-201ENST00000298231 TSR2Q969E8 191 aaKnown RBP33.93■■■■□ 3.02
PHOX2A-201ENST00000298231 PEAK1Q9H792 1746 aa33.92■■■■□ 3.02
PHOX2A-201ENST00000298231 EXOSC9Q06265 439 aaKnown RBP33.92■■■■□ 3.02
PHOX2A-201ENST00000298231 RRS1Q15050 365 aaKnown RBP33.92■■■■□ 3.02
PHOX2A-201ENST00000298231 ZKSCAN2Q63HK3 967 aa33.92■■■■□ 3.02
PHOX2A-201ENST00000298231 PANK1Q8TE04 598 aa33.9■■■■□ 3.02
PHOX2A-201ENST00000298231 PIK3C2AO00443 1686 aa33.9■■■■□ 3.02
PHOX2A-201ENST00000298231 ANP32AP39687 249 aaKnown RBP33.89■■■■□ 3.02
PHOX2A-201ENST00000298231 DDX17Q92841 729 aaKnown RBP33.89■■■■□ 3.02
PHOX2A-201ENST00000298231 BACH2Q9BYV9 841 aa33.89■■■■□ 3.02
PHOX2A-201ENST00000298231 COG6Q9Y2V7 657 aa33.89■■■■□ 3.02
PHOX2A-201ENST00000298231 DLG5Q8TDM6 1919 aa33.89■■■■□ 3.01
PHOX2A-201ENST00000298231 NPHP3Q7Z494 1330 aa33.88■■■■□ 3.01
PHOX2A-201ENST00000298231 HMOX1P09601 288 aa33.88■■■■□ 3.01
PHOX2A-201ENST00000298231 PDE4AP27815 886 aa33.88■■■■□ 3.01
PHOX2A-201ENST00000298231 ALDH1L2Q3SY69 923 aa33.88■■■■□ 3.01
PHOX2A-201ENST00000298231 PHF8Q9UPP1 1060 aa33.88■■■■□ 3.01
PHOX2A-201ENST00000298231 SOS2Q07890 1332 aaPredicted RBP33.88■■■■□ 3.01
PHOX2A-201ENST00000298231 KIF16BQ96L93 1317 aa33.88■■■■□ 3.01
PHOX2A-201ENST00000298231 IFT57Q9NWB7 429 aa33.87■■■■□ 3.01
PHOX2A-201ENST00000298231 SMC4Q9NTJ3 1288 aa33.86■■■■□ 3.01
PHOX2A-201ENST00000298231 KIF24Q5T7B8 1368 aa33.85■■■■□ 3.01
PHOX2A-201ENST00000298231 MYT1Q01538 1121 aa33.85■■■■□ 3.01
PHOX2A-201ENST00000298231 PMFBP1Q8TBY8 1022 aa33.85■■■■□ 3.01
PHOX2A-201ENST00000298231 PHACTR3Q96KR7 559 aa33.85■■■■□ 3.01
PHOX2A-201ENST00000298231 PXDNQ92626 1479 aa33.85■■■■□ 3.01
PHOX2A-201ENST00000298231 FOXO3O43524 673 aa33.84■■■■□ 3.01
PHOX2A-201ENST00000298231 GNAI1P63096 354 aa33.84■■■■□ 3.01
PHOX2A-201ENST00000298231 NGDNQ8NEJ9 315 aaKnown RBP33.84■■■■□ 3.01
PHOX2A-201ENST00000298231 SBNO1A3KN83 1393 aa33.84■■■■□ 3.01
PHOX2A-201ENST00000298231 ARHGEF10O15013 1369 aa33.84■■■■□ 3.01
PHOX2A-201ENST00000298231 JCADQ9P266 1359 aa33.84■■■■□ 3.01
PHOX2A-201ENST00000298231 BRPF1P55201 1214 aaPredicted RBP33.84■■■■□ 3.01
PHOX2A-201ENST00000298231 ANP32EQ9BTT0 268 aa33.84■■■■□ 3.01
PHOX2A-201ENST00000298231 MSH5O43196 834 aa33.83■■■■□ 3.01
PHOX2A-201ENST00000298231 EIF4A2Q14240 407 aaKnown RBP33.83■■■■□ 3.01
PHOX2A-201ENST00000298231 FLT4P35916 1363 aa33.82■■■■□ 3.01
PHOX2A-201ENST00000298231 MVPQ14764 893 aaKnown RBP33.82■■■■□ 3
PHOX2A-201ENST00000298231 DZIP1LQ8IYY4 767 aaKnown RBP33.82■■■■□ 3
PHOX2A-201ENST00000298231 BCL2L13Q9BXK5 485 aa33.82■■■■□ 3
PHOX2A-201ENST00000298231 LRRC59Q96AG4 307 aaKnown RBP33.8■■■■□ 3
PHOX2A-201ENST00000298231 RLBP1P12271 317 aa33.8■■■■□ 3
PHOX2A-201ENST00000298231 FTSJ3Q8IY81 847 aaKnown RBP33.8■■■■□ 3
PHOX2A-201ENST00000298231 SSH1Q8WYL5 1049 aa33.8■■■■□ 3
PHOX2A-201ENST00000298231 ZNF853P0CG23 659 aa33.79■■■■□ 3
PHOX2A-201ENST00000298231 MARF1Q9Y4F3 1742 aaKnown RBP33.79■■■■□ 3
PHOX2A-201ENST00000298231 IPO8O15397 1037 aaKnown RBP33.78■■■■□ 3
PHOX2A-201ENST00000298231 ATF7IPQ6VMQ6 1270 aa33.77■■■■□ 3
PHOX2A-201ENST00000298231 CFAP44Q96MT7 982 aa33.74■■■□□ 2.99
PHOX2A-201ENST00000298231 DDX19BQ9UMR2 479 aa33.74■■■□□ 2.99
PHOX2A-201ENST00000298231 MAP3K19Q56UN5 1328 aa33.73■■■□□ 2.99
PHOX2A-201ENST00000298231 XPCQ01831 940 aaPredicted RBP33.73■■■□□ 2.99
PHOX2A-201ENST00000298231 TRIM27P14373 513 aa33.72■■■□□ 2.99
PHOX2A-201ENST00000298231 KRT28Q7Z3Y7 464 aa33.72■■■□□ 2.99
PHOX2A-201ENST00000298231 KDRP35968 1356 aa33.71■■■□□ 2.99
PHOX2A-201ENST00000298231 VIRMAQ69YN4 1812 aaKnown RBP33.71■■■□□ 2.99
PHOX2A-201ENST00000298231 IGHDP01880 384 aa33.71■■■□□ 2.99
PHOX2A-201ENST00000298231 ERICH6Q7L0X2 663 aa33.71■■■□□ 2.99
PHOX2A-201ENST00000298231 IPO9Q96P70 1041 aaKnown RBP33.71■■■□□ 2.99
PHOX2A-201ENST00000298231 SPATA31A6Q5VVP1 1343 aa33.7■■■□□ 2.99
PHOX2A-201ENST00000298231 MED1Q15648 1581 aaPredicted RBP33.69■■■□□ 2.98
PHOX2A-201ENST00000298231 PSME1Q06323 249 aa33.69■■■□□ 2.98
PHOX2A-201ENST00000298231 FAM161AQ3B820 660 aa33.69■■■□□ 2.98
PHOX2A-201ENST00000298231 SULT6B1Q6IMI4 303 aa33.69■■■□□ 2.98
PHOX2A-201ENST00000298231 TNNQ9UQP3 1299 aa33.69■■■□□ 2.98
PHOX2A-201ENST00000298231 RWDD1Q9H446 243 aaPredicted RBP33.68■■■□□ 2.98
PHOX2A-201ENST00000298231 RTL1A6NKG5 1358 aa33.68■■■□□ 2.98
PHOX2A-201ENST00000298231 TRPM3Q9HCF6 1732 aaPredicted RBP33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms