RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PPP1R42Q7Z4L9 355 aa16.35■□□□□ 0.21
PRPF38A-201ENST00000257181 RPGRQ92834 1020 aaKnown RBP16.35■□□□□ 0.21
PRPF38A-201ENST00000257181 YEATS2Q9ULM3 1422 aa16.35■□□□□ 0.21
PRPF38A-201ENST00000257181 BAG6P46379 1132 aa16.35■□□□□ 0.21
PRPF38A-201ENST00000257181 NFE2L2Q16236 605 aa16.34■□□□□ 0.21
PRPF38A-201ENST00000257181 CLASRPQ8N2M8 674 aaKnown RBP16.34■□□□□ 0.21
PRPF38A-201ENST00000257181 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
PRPF38A-201ENST00000257181 AKAP2Q9Y2D5 859 aa16.34■□□□□ 0.21
PRPF38A-201ENST00000257181 LARP1Q6PKG0 1096 aaKnown RBP16.34■□□□□ 0.21
PRPF38A-201ENST00000257181 WAPLQ7Z5K2 1190 aa16.33■□□□□ 0.21
PRPF38A-201ENST00000257181 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.21
PRPF38A-201ENST00000257181 APPP05067 770 aa16.33■□□□□ 0.21
PRPF38A-201ENST00000257181 GBP4Q96PP9 640 aa16.33■□□□□ 0.21
PRPF38A-201ENST00000257181 PTPRKQ15262 1439 aa16.33■□□□□ 0.2
PRPF38A-201ENST00000257181 CCDC43Q96MW1 224 aaKnown RBP16.33■□□□□ 0.2
PRPF38A-201ENST00000257181 SRCIN1Q9C0H9 1055 aa16.33■□□□□ 0.2
PRPF38A-201ENST00000257181 NYXQ9GZU5 481 aa16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 PPP4R3BQ5MIZ7 849 aa16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 WWC2Q6AWC2 1192 aa16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 C8orf37Q96NL8 207 aa16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 HYPKQ9NX55 129 aa16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 DNMT1P26358 1616 aaKnown RBP16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 TPM2P07951 284 aa16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 TAF7Q15545 349 aaPredicted RBP16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 C16orf71Q8IYS4 520 aaPredicted RBP16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 ACEP12821 1306 aa16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 TWISTNBQ3B726 338 aaPredicted RBP16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
PRPF38A-201ENST00000257181 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
PRPF38A-201ENST00000257181 SOS1Q07889 1333 aaPredicted RBP16.31■□□□□ 0.2
PRPF38A-201ENST00000257181 RFC4P35249 363 aa16.31■□□□□ 0.2
PRPF38A-201ENST00000257181 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
PRPF38A-201ENST00000257181 TTC39AQ5SRH9 613 aa16.31■□□□□ 0.2
PRPF38A-201ENST00000257181 ZCRB1Q8TBF4 217 aaKnown RBP16.31■□□□□ 0.2
PRPF38A-201ENST00000257181 RALYLQ86SE5 291 aaKnown RBP16.31■□□□□ 0.2
PRPF38A-201ENST00000257181 CCDC27Q2M243 656 aa16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 ADGRF5Q8IZF2 1346 aa16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 GNAI2P04899 355 aa16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 IL2RBP14784 551 aa16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 DHX16O60231 1041 aaKnown RBP16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 HOOK1Q9UJC3 728 aaKnown RBP16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 CNTROBQ8N137 903 aa16.3■□□□□ 0.2
PRPF38A-201ENST00000257181 ELL2O00472 640 aaPredicted RBP16.29■□□□□ 0.2
PRPF38A-201ENST00000257181 ATF7IPQ6VMQ6 1270 aa16.29■□□□□ 0.2
PRPF38A-201ENST00000257181 PTMAP06454 111 aaKnown RBP16.29■□□□□ 0.2
PRPF38A-201ENST00000257181 IRX6P78412 446 aaPredicted RBP16.29■□□□□ 0.2
PRPF38A-201ENST00000257181 SAFBQ15424 915 aaKnown RBP eCLIP16.29■□□□□ 0.2
PRPF38A-201ENST00000257181 TRIM44Q96DX7 344 aaPredicted RBP16.29■□□□□ 0.2
PRPF38A-201ENST00000257181 PSMA5P28066 241 aa16.29■□□□□ 0.2
PRPF38A-201ENST00000257181 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
PRPF38A-201ENST00000257181 FAM184AQ8NB25 1140 aa16.29■□□□□ 0.2
PRPF38A-201ENST00000257181 CAVIN4Q5BKX8 364 aa16.28■□□□□ 0.2
PRPF38A-201ENST00000257181 NEUROD6Q96NK8 337 aa16.28■□□□□ 0.2
PRPF38A-201ENST00000257181 CDC5LQ99459 802 aaKnown RBP16.28■□□□□ 0.2
PRPF38A-201ENST00000257181 ZFYVE9O95405 1425 aa16.28■□□□□ 0.2
PRPF38A-201ENST00000257181 ARHGEF12Q9NZN5 1544 aa16.28■□□□□ 0.2
PRPF38A-201ENST00000257181 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
PRPF38A-201ENST00000257181 PCDH11XQ9BZA7 1347 aa16.27■□□□□ 0.2
PRPF38A-201ENST00000257181 PCDH11YQ9BZA8 1340 aa16.27■□□□□ 0.2
PRPF38A-201ENST00000257181 PLEKHG1Q9ULL1 1385 aa16.27■□□□□ 0.2
PRPF38A-201ENST00000257181 CPLX1O14810 134 aa16.27■□□□□ 0.19
PRPF38A-201ENST00000257181 HSPA2P54652 639 aa16.26■□□□□ 0.19
PRPF38A-201ENST00000257181 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
PRPF38A-201ENST00000257181 ZCCHC11Q5TAX3 1644 aaKnown RBP16.26■□□□□ 0.19
PRPF38A-201ENST00000257181 RILPL2Q969X0 211 aa16.25■□□□□ 0.19
PRPF38A-201ENST00000257181 ANKRD45Q5TZF3 282 aa16.25■□□□□ 0.19
PRPF38A-201ENST00000257181 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
PRPF38A-201ENST00000257181 PARP3Q9Y6F1 533 aa16.25■□□□□ 0.19
PRPF38A-201ENST00000257181 INTS3Q68E01 1043 aaKnown RBP16.25■□□□□ 0.19
PRPF38A-201ENST00000257181 HDAC9Q9UKV0 1011 aa16.25■□□□□ 0.19
PRPF38A-201ENST00000257181 ABCC1P33527 1531 aa16.25■□□□□ 0.19
PRPF38A-201ENST00000257181 LDHCP07864 332 aa16.25■□□□□ 0.19
PRPF38A-201ENST00000257181 NFXL1Q6ZNB6 911 aa16.25■□□□□ 0.19
PRPF38A-201ENST00000257181 H3BQV1 296 aa16.24■□□□□ 0.19
PRPF38A-201ENST00000257181 IFFO2Q5TF58 517 aa16.24■□□□□ 0.19
PRPF38A-201ENST00000257181 CLUAP1Q96AJ1 413 aa16.24■□□□□ 0.19
PRPF38A-201ENST00000257181 MYO1BO43795 1136 aa16.24■□□□□ 0.19
PRPF38A-201ENST00000257181 SPTY2D1Q68D10 685 aaPredicted RBP16.24■□□□□ 0.19
PRPF38A-201ENST00000257181 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
PRPF38A-201ENST00000257181 B4GALNT3Q6L9W6 998 aa16.24■□□□□ 0.19
PRPF38A-201ENST00000257181 GCC1Q96CN9 775 aa16.24■□□□□ 0.19
PRPF38A-201ENST00000257181 MPHOSPH6Q99547 160 aaKnown RBP16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 TRPC5Q9UL62 973 aaPredicted RBP16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 NPATQ14207 1427 aa16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 YTHDC2Q9H6S0 1430 aaKnown RBP16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 FLT4P35916 1363 aa16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 EFCAB6Q5THR3 1501 aa16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 PHF14O94880 888 aa16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 SLAIN2Q9P270 581 aa16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
PRPF38A-201ENST00000257181 RAD21O60216 631 aa16.22■□□□□ 0.19
PRPF38A-201ENST00000257181 NF2P35240 595 aa16.22■□□□□ 0.19
PRPF38A-201ENST00000257181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.22■□□□□ 0.19
PRPF38A-201ENST00000257181 KDM5CP41229 1560 aa16.22■□□□□ 0.19
PRPF38A-201ENST00000257181 SNRPA1P09661 255 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms