RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 PLEKHG3A1L390 1219 aa21.73■■□□□ 1.07
GAPDH-201ENST00000229239 ORAI2Q96SN7 254 aa21.73■■□□□ 1.07
GAPDH-201ENST00000229239 TRIM35Q9UPQ4 493 aa21.73■■□□□ 1.07
GAPDH-201ENST00000229239 PRR36Q9H6K5 1346 aa21.73■■□□□ 1.07
GAPDH-201ENST00000229239 NME9Q86XW9 330 aa21.72■■□□□ 1.07
GAPDH-201ENST00000229239 SOCS7O14512 581 aa21.71■■□□□ 1.07
GAPDH-201ENST00000229239 MSH5O43196 834 aa21.71■■□□□ 1.07
GAPDH-201ENST00000229239 ANP32AP39687 249 aaKnown RBP21.71■■□□□ 1.07
GAPDH-201ENST00000229239 RSPH6AQ9H0K4 717 aa21.71■■□□□ 1.07
GAPDH-201ENST00000229239 MAP2P11137 1827 aaKnown RBP21.71■■□□□ 1.07
GAPDH-201ENST00000229239 DDX17Q92841 729 aaKnown RBP21.71■■□□□ 1.07
GAPDH-201ENST00000229239 NRKQ7Z2Y5 1582 aa21.71■■□□□ 1.07
GAPDH-201ENST00000229239 RIPK4P57078 832 aa21.7■■□□□ 1.06
GAPDH-201ENST00000229239 RGS17Q9UGC6 210 aaPredicted RBP21.7■■□□□ 1.06
GAPDH-201ENST00000229239 PDE4AP27815 886 aa21.69■■□□□ 1.06
GAPDH-201ENST00000229239 NUTM2FA1L443 756 aa21.69■■□□□ 1.06
GAPDH-201ENST00000229239 ESCO1Q5FWF5 840 aa21.69■■□□□ 1.06
GAPDH-201ENST00000229239 BACH2Q9BYV9 841 aa21.69■■□□□ 1.06
GAPDH-201ENST00000229239 IL13P35225 146 aa21.68■■□□□ 1.06
GAPDH-201ENST00000229239 CALD1Q05682 793 aaKnown RBP21.67■■□□□ 1.06
GAPDH-201ENST00000229239 LRRC59Q96AG4 307 aaKnown RBP21.67■■□□□ 1.06
GAPDH-201ENST00000229239 CLUAP1Q96AJ1 413 aa21.67■■□□□ 1.06
GAPDH-201ENST00000229239 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
GAPDH-201ENST00000229239 USP6P35125 1406 aa21.66■■□□□ 1.06
GAPDH-201ENST00000229239 TTC21BQ7Z4L5 1316 aa21.66■■□□□ 1.06
GAPDH-201ENST00000229239 PPM1GO15355 546 aaPredicted RBP21.66■■□□□ 1.06
GAPDH-201ENST00000229239 PRKAR2BP31323 418 aa21.66■■□□□ 1.06
GAPDH-201ENST00000229239 FRAT1Q92837 279 aaPredicted RBP21.65■■□□□ 1.06
GAPDH-201ENST00000229239 EMILIN1Q9Y6C2 1016 aa21.65■■□□□ 1.06
GAPDH-201ENST00000229239 LRP6O75581 1613 aa21.65■■□□□ 1.06
GAPDH-201ENST00000229239 SPATA31A6Q5VVP1 1343 aa21.65■■□□□ 1.06
GAPDH-201ENST00000229239 NFE2L2Q16236 605 aa21.64■■□□□ 1.06
GAPDH-201ENST00000229239 ZNF428Q96B54 188 aa21.64■■□□□ 1.06
GAPDH-201ENST00000229239 OVOS2A0A0J9YW53 1432 aa21.64■■□□□ 1.05
GAPDH-201ENST00000229239 OVOS2Q6IE36 1432 aa21.64■■□□□ 1.05
GAPDH-201ENST00000229239 ACEP12821 1306 aa21.64■■□□□ 1.05
GAPDH-201ENST00000229239 ZKSCAN2Q63HK3 967 aa21.63■■□□□ 1.05
GAPDH-201ENST00000229239 PANK1Q8TE04 598 aa21.63■■□□□ 1.05
GAPDH-201ENST00000229239 COG6Q9Y2V7 657 aa21.63■■□□□ 1.05
GAPDH-201ENST00000229239 TTC21AQ8NDW8 1320 aa21.63■■□□□ 1.05
GAPDH-201ENST00000229239 SSH2Q76I76 1423 aa21.62■■□□□ 1.05
GAPDH-201ENST00000229239 SOS2Q07890 1332 aaPredicted RBP21.62■■□□□ 1.05
GAPDH-201ENST00000229239 EXOSC9Q06265 439 aaKnown RBP21.62■■□□□ 1.05
GAPDH-201ENST00000229239 LMOD3Q0VAK6 560 aa21.62■■□□□ 1.05
GAPDH-201ENST00000229239 FOXO3O43524 673 aa21.61■■□□□ 1.05
GAPDH-201ENST00000229239 PMFBP1Q8TBY8 1022 aa21.61■■□□□ 1.05
GAPDH-201ENST00000229239 TSR2Q969E8 191 aaKnown RBP21.61■■□□□ 1.05
GAPDH-201ENST00000229239 ZRANB1Q9UGI0 708 aa21.61■■□□□ 1.05
GAPDH-201ENST00000229239 USP31Q70CQ4 1352 aa21.61■■□□□ 1.05
GAPDH-201ENST00000229239 FMN2Q9NZ56 1722 aa21.61■■□□□ 1.05
GAPDH-201ENST00000229239 NPHP3Q7Z494 1330 aa21.61■■□□□ 1.05
GAPDH-201ENST00000229239 ANKARQ7Z5J8 1434 aa21.61■■□□□ 1.05
GAPDH-201ENST00000229239 IPO9Q96P70 1041 aaKnown RBP21.6■■□□□ 1.05
GAPDH-201ENST00000229239 FBLN1P23142 703 aa21.6■■□□□ 1.05
GAPDH-201ENST00000229239 ALDH1L2Q3SY69 923 aa21.59■■□□□ 1.05
GAPDH-201ENST00000229239 SMC4Q9NTJ3 1288 aa21.58■■□□□ 1.04
GAPDH-201ENST00000229239 NUTM2BA6NNL0 878 aaPredicted RBP21.57■■□□□ 1.04
GAPDH-201ENST00000229239 NUTM2EB1AL46 878 aaPredicted RBP21.57■■□□□ 1.04
GAPDH-201ENST00000229239 MVPQ14764 893 aaKnown RBP21.57■■□□□ 1.04
GAPDH-201ENST00000229239 NUTM2AQ8IVF1 878 aaPredicted RBP21.57■■□□□ 1.04
GAPDH-201ENST00000229239 KIF16BQ96L93 1317 aa21.57■■□□□ 1.04
GAPDH-201ENST00000229239 BRPF1P55201 1214 aaPredicted RBP21.56■■□□□ 1.04
GAPDH-201ENST00000229239 POTEAQ6S8J7 498 aa21.56■■□□□ 1.04
GAPDH-201ENST00000229239 DZIP1LQ8IYY4 767 aaKnown RBP21.56■■□□□ 1.04
GAPDH-201ENST00000229239 NOP58Q9Y2X3 529 aaKnown RBP21.56■■□□□ 1.04
GAPDH-201ENST00000229239 HMOX1P09601 288 aa21.56■■□□□ 1.04
GAPDH-201ENST00000229239 XPCQ01831 940 aaPredicted RBP21.56■■□□□ 1.04
GAPDH-201ENST00000229239 RRS1Q15050 365 aaKnown RBP21.56■■□□□ 1.04
GAPDH-201ENST00000229239 MEX3CQ5U5Q3 659 aaKnown RBP21.56■■□□□ 1.04
GAPDH-201ENST00000229239 BCL2L13Q9BXK5 485 aa21.56■■□□□ 1.04
GAPDH-201ENST00000229239 IFT57Q9NWB7 429 aa21.56■■□□□ 1.04
GAPDH-201ENST00000229239 IPO8O15397 1037 aaKnown RBP21.55■■□□□ 1.04
GAPDH-201ENST00000229239 RLBP1P12271 317 aa21.55■■□□□ 1.04
GAPDH-201ENST00000229239 GNAI1P63096 354 aa21.55■■□□□ 1.04
GAPDH-201ENST00000229239 FTSJ3Q8IY81 847 aaKnown RBP21.55■■□□□ 1.04
GAPDH-201ENST00000229239 PHACTR3Q96KR7 559 aa21.55■■□□□ 1.04
GAPDH-201ENST00000229239 PHF8Q9UPP1 1060 aa21.55■■□□□ 1.04
GAPDH-201ENST00000229239 IGHDP01880 384 aa21.54■■□□□ 1.04
GAPDH-201ENST00000229239 FAM161AQ3B820 660 aa21.54■■□□□ 1.04
GAPDH-201ENST00000229239 SSH1Q8WYL5 1049 aa21.54■■□□□ 1.04
GAPDH-201ENST00000229239 RGPD8O14715 1765 aaPredicted RBP21.54■■□□□ 1.04
GAPDH-201ENST00000229239 ATF7IPQ6VMQ6 1270 aa21.52■■□□□ 1.04
GAPDH-201ENST00000229239 RWDD1Q9H446 243 aaPredicted RBP21.52■■□□□ 1.03
GAPDH-201ENST00000229239 PXDNQ92626 1479 aa21.51■■□□□ 1.03
GAPDH-201ENST00000229239 ZNF853P0CG23 659 aa21.51■■□□□ 1.03
GAPDH-201ENST00000229239 DDX19BQ9UMR2 479 aa21.51■■□□□ 1.03
GAPDH-201ENST00000229239 EIF4A2Q14240 407 aaKnown RBP21.5■■□□□ 1.03
GAPDH-201ENST00000229239 KRT28Q7Z3Y7 464 aa21.5■■□□□ 1.03
GAPDH-201ENST00000229239 ZBTB47Q9UFB7 747 aaPredicted RBP21.5■■□□□ 1.03
GAPDH-201ENST00000229239 KIF1AQ12756 1690 aa21.5■■□□□ 1.03
GAPDH-201ENST00000229239 COL22A1Q8NFW1 1626 aaPredicted RBP21.5■■□□□ 1.03
GAPDH-201ENST00000229239 TRIM27P14373 513 aa21.49■■□□□ 1.03
GAPDH-201ENST00000229239 RGPD1P0DJD0 1748 aa21.48■■□□□ 1.03
GAPDH-201ENST00000229239 SKAP1Q86WV1 359 aa21.48■■□□□ 1.03
GAPDH-201ENST00000229239 NGDNQ8NEJ9 315 aaKnown RBP21.48■■□□□ 1.03
GAPDH-201ENST00000229239 DDRGK1Q96HY6 314 aa21.48■■□□□ 1.03
GAPDH-201ENST00000229239 CHMP4BQ9H444 224 aaKnown RBP21.48■■□□□ 1.03
GAPDH-201ENST00000229239 TNNQ9UQP3 1299 aa21.48■■□□□ 1.03
GAPDH-201ENST00000229239 PSME1Q06323 249 aa21.47■■□□□ 1.03
GAPDH-201ENST00000229239 CFAP44Q96MT7 982 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms