RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 MYZAPP0CAP1 466 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 SMAD4Q13485 552 aaKnown RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 ZNF234Q14588 700 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 MYLK3Q32MK0 819 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 CARD16Q5EG05 197 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 NUDT18Q6ZVK8 323 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 TRMT10CQ7L0Y3 403 aaKnown RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 TAX1BP1Q86VP1 789 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 PPHLN1Q8NEY8 458 aaKnown RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 OR13C4Q8NGS5 318 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 RUBCNQ92622 972 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 ZNF599Q96NL3 588 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 IARS2Q9NSE4 1012 aaKnown RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 NDC80O14777 642 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 PSMD3O43242 534 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 LEFTY1O75610 366 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 POLBP06746 335 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 POU2F2P09086 479 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 SERPINA4P29622 427 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 MSH2P43246 934 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 SULT2A1Q06520 285 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 ZNF33AQ06730 810 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 FCHO2Q0JRZ9 810 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 BMPR2Q13873 1038 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 INO80DQ53TQ3 878 aaPredicted RBP10.28□□□□□ -0.76
NEK9-205ENST00000555405 KDELC1Q6UW63 502 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 GLT6D1Q7Z4J2 308 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 MCUQ8NE86 351 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 E2F7Q96AV8 911 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 MGME1Q9BQP7 344 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 FAM96AQ9H5X1 160 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 ATP13A3Q9H7F0 1226 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 KCNK9Q9NPC2 374 aa10.28□□□□□ -0.76
NEK9-205ENST00000555405 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.28□□□□□ -0.76
NEK9-205ENST00000555405 A0A087WUV0 522 aaPredicted RBP10.27□□□□□ -0.77
NEK9-205ENST00000555405 TCRBV9S1A1TA0A576 114 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 INHBAP08476 426 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 CISD3P0C7P0 127 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 METAP1P53582 386 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 PGGT1BP53609 377 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 CDK16Q00536 496 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 SLC12A1Q13621 1099 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 THOC5Q13769 683 aaKnown RBP10.27□□□□□ -0.77
NEK9-205ENST00000555405 FAM124AQ86V42 546 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 TEX26Q8N6G2 289 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 FCRL3Q96P31 734 aaPredicted RBP10.27□□□□□ -0.77
NEK9-205ENST00000555405 SELENOSQ9BQE4 189 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 SLC6A17Q9H1V8 727 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 TSR3Q9UJK0 312 aaKnown RBP10.27□□□□□ -0.77
NEK9-205ENST00000555405 CXorf49A8MYA2 514 aaPredicted RBP10.27□□□□□ -0.77
NEK9-205ENST00000555405 SPECC1L-ADORA2AF8WAN1 911 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 HOXC11O43248 304 aaPredicted RBP10.27□□□□□ -0.77
NEK9-205ENST00000555405 SYNCRIPO60506 623 aaKnown RBP10.27□□□□□ -0.77
NEK9-205ENST00000555405 SIN3BO75182 1162 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 NDST3O95803 873 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 IL12RB1P42701 662 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 ATP1A2P50993 1020 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 CTBP1Q13363 440 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 MROH9Q5TGP6 573 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 TTC19Q6DKK2 380 aaPredicted RBP10.27□□□□□ -0.77
NEK9-205ENST00000555405 RANBP10Q6VN20 620 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 ZNF783Q6ZMS7 281 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 TPRG1Q6ZUI0 275 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 RASSF3Q86WH2 238 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 MGARPQ8TDB4 240 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 HDAC10Q969S8 669 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 MYO19Q96H55 970 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 TBATAQ96M53 351 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 NUDCD1Q96RS6 583 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 ADGRE3Q9BY15 652 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 MLXIPLQ9NP71 852 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 ZFATQ9P243 1243 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 VPS18Q9P253 973 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 CD84Q9UIB8 345 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 SPO11Q9Y5K1 396 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 TEX264Q9Y6I9 313 aa10.27□□□□□ -0.77
NEK9-205ENST00000555405 C1orf232A0A0U1RR37 186 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 SOBPA7XYQ1 873 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 STX7O15400 261 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 ECI2O75521 394 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 PSMD8P48556 350 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 CBX1P83916 185 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 SLC20A2Q08357 652 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 RFTN1Q14699 578 aaPredicted RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 UBXN2BQ14CS0 331 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 ANKRD20A4Q4UJ75 823 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 KCTD11Q693B1 232 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 CEP128Q6ZU80 1094 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 TAS2R42Q7RTR8 314 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 OR4K2Q8NGD2 314 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 DNAJC1Q96KC8 554 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 AGAP2Q99490 1192 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 PAIP2Q9BPZ3 127 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 HEPHQ9BQS7 1158 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 SLC2A11Q9BYW1 496 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 SUV39H2Q9H5I1 410 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 CASS4Q9NQ75 786 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 VPS45Q9NRW7 570 aa10.26□□□□□ -0.77
NEK9-205ENST00000555405 NYNRINQ9P2P1 1898 aaKnown RBP10.26□□□□□ -0.77
NEK9-205ENST00000555405 DENND4CQ5VZ89 1909 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms