RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SERPINF2P08697 491 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 SPATA31D3P0C874 917 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 SAT1P21673 171 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 DNAJB1P25685 340 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 TARSP26639 723 aaKnown RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 LEPRP48357 1165 aaKnown RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 CLCN5P51795 746 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 RAB10P61026 200 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 ELF3P78545 371 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 DLG1Q12959 904 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 SLC12A1Q13621 1099 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 ZNF460Q14592 562 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 TXNDC8Q6A555 127 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 LRRC8EQ6NSJ5 796 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 ZYG11AQ6WRX3 759 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 ZNF783Q6ZMS7 281 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 SPATA31D4Q6ZUB0 917 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 RAPH1Q70E73 1250 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 OTOP2Q7RTS6 562 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 CCDC91Q7Z6B0 441 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 NECAB2Q7Z6G3 386 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 CLNKQ7Z7G1 428 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 TBC1D1Q86TI0 1168 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 MTDHQ86UE4 582 aaKnown RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 LCA5Q86VQ0 697 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 HS6ST3Q8IZP7 471 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 TMEM151AQ8N4L1 468 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 KIF2BQ8N4N8 673 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 FIBCD1Q8N539 461 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 HJURPQ8NCD3 748 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 RDH11Q8TC12 318 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 CALML6Q8TD86 181 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 KLHL29Q96CT2 875 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 SLC7A6OSQ96CW6 309 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 EXOC2Q96KP1 924 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 CYP2S1Q96SQ9 504 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 LRMDAQ9H2I8 198 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 NMRAL1Q9HBL8 299 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 NOD2Q9HC29 1040 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 SAR1AQ9NR31 198 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 ARHGEF3Q9NR81 526 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 MARCH4Q9P2E8 410 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 MARCOQ9UEW3 520 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-208ENST00000551338 RIMKLBQ9ULI2 386 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 ASB3Q9Y575 518 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 PCDHB12Q9Y5F1 795 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 CPQQ9Y646 472 aa11.59□□□□□ -0.55
RAB5C-208ENST00000551338 PLXNB3Q9ULL4 1909 aa11.58□□□□□ -0.55
RAB5C-208ENST00000551338 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TMEM114B3SHH9 223 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TARM1B6A8C7 271 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TK2O00142 265 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 FCHO1O14526 889 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 INSIG1O15503 277 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TGM5O43548 720 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 RPP40O75818 363 aaKnown RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 LUC7L3O95232 432 aaKnown RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 WISP3O95389 354 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 CBX6O95503 412 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 PRLP01236 227 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 KRT16P08779 473 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 KITP10721 976 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 HSPA8P11142 646 aaKnown RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 COL6A2P12110 1019 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 STMN1P16949 149 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 GRK2P25098 689 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 GABRR2P28476 465 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 MZF1P28698 734 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 CA8P35219 290 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 ABCE1P61221 599 aaKnown RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 NSUN2Q08J23 767 aaKnown RBP eCLIP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TUBB3Q13509 450 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 PTPRCAPQ14761 206 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 FSCBQ5H9T9 825 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 CYB5D1Q6P9G0 228 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 LILRA6Q6PI73 481 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 NAPRTQ6XQN6 538 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 GAREM2Q75VX8 874 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 PTAR1Q7Z6K3 402 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TTC7BQ86TV6 843 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 ALYREFQ86V81 257 aaKnown RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 LMNTD2Q8IXW0 634 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TNS4Q8IZW8 715 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 CARNMT1Q8N4J0 409 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 GPATCH11Q8N954 259 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 OR13C4Q8NGS5 318 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 WFDC5Q8TCV5 224 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 BLOC1S5Q8TDH9 187 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 STYXQ8WUJ0 223 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 INPP5DQ92835 1189 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 PEX13Q92968 403 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 HDAC10Q969S8 669 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 ALG14Q96F25 216 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 DNAJC1Q96KC8 554 aaKnown RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TBATAQ96M53 351 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 GPR78Q96P69 363 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 NUDCD1Q96RS6 583 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 OLFM1Q99784 485 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms