RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 C18orf65Q6ZTR6 163 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 CREB3L2Q70SY1 520 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 C16orf82Q7Z2V1 217 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 TADA2BQ86TJ2 420 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 TMTC1Q8IUR5 882 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 CCDC105Q8IYK2 499 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 KIAA2013Q8IYS2 634 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 GJC3Q8NFK1 279 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 ARRDC2Q8TBH0 407 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 USP13Q92995 863 aaPredicted RBP6.21□□□□□ -1.42
YBX3-210ENST00000540975 HVCN1Q96D96 273 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 RTP4Q96DX8 246 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 LRFN5Q96NI6 719 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 PSMD1Q99460 953 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 CYSLTR2Q9NS75 346 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 SLC25A10Q9UBX3 287 aaPredicted RBP6.21□□□□□ -1.42
YBX3-210ENST00000540975 PAM16Q9Y3D7 125 aa6.21□□□□□ -1.42
YBX3-210ENST00000540975 GAGE10A6NGK3 116 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 BTBD18B2RXH4 712 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 PYGLP06737 847 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 FMO4P31512 558 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 VAMP2P63027 116 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 CAMK1Q14012 370 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 GPAT4Q86UL3 456 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 SMAP1Q8IYB5 467 aaPredicted RBP6.2□□□□□ -1.42
YBX3-210ENST00000540975 C11orf65Q8NCR3 313 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 ZCCHC10Q8TBK6 192 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 NOC3LQ8WTT2 800 aaKnown RBP6.2□□□□□ -1.42
YBX3-210ENST00000540975 OTULINQ96BN8 352 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 ZBTB10Q96DT7 871 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 FUZQ9BT04 418 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 SAGE1Q9NXZ1 904 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 NFE2L3Q9Y4A8 694 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 A3GALT2U3KPV4 340 aa6.2□□□□□ -1.42
YBX3-210ENST00000540975 A0A0U1RQF3 1178 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 RRN3P2A6NIE6 340 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 SRRM3A6NNA2 597 aaPredicted RBP6.19□□□□□ -1.42
YBX3-210ENST00000540975 PRR23D1E9PI22 279 aaPredicted RBP6.19□□□□□ -1.42
YBX3-210ENST00000540975 HOXC11O43248 304 aaPredicted RBP6.19□□□□□ -1.42
YBX3-210ENST00000540975 CH25HO95992 272 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 PRR23D2P0DMB1 279 aaPredicted RBP6.19□□□□□ -1.42
YBX3-210ENST00000540975 ITGAXP20702 1163 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 PIGAP37287 484 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 TRPC3Q13507 836 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 TAF11Q15544 211 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 NAA35Q5VZE5 725 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 NEK10Q6ZWH5 1172 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 PGBD5Q8N414 524 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 PARP16Q8N5Y8 322 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 LBHD1Q9BQE6 289 aaPredicted RBP6.19□□□□□ -1.42
YBX3-210ENST00000540975 SMYD2Q9NRG4 433 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 PCDHGB1Q9Y5G3 927 aa6.19□□□□□ -1.42
YBX3-210ENST00000540975 NCAM2O15394 837 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 HSPA12AO43301 675 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 KLK8O60259 260 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 MTA2O94776 668 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 GALTP07902 379 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 EDN2P20800 178 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 IZUMO4Q1ZYL8 232 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 KIF19Q2TAC6 998 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 TMEM95Q3KNT9 176 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 H1FNTQ75WM6 255 aaPredicted RBP6.18□□□□□ -1.42
YBX3-210ENST00000540975 SHFQ7M4L6 423 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 ZC3HAV1LQ96H79 300 aaKnown RBP6.18□□□□□ -1.42
YBX3-210ENST00000540975 APOPT1Q96IL0 206 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 MXRA8Q9BRK3 442 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 CTNNAL1Q9UBT7 734 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 CARD8Q9Y2G2 431 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 LRRFIP2Q9Y608 721 aaKnown RBP6.18□□□□□ -1.42
YBX3-210ENST00000540975 CNTNAP2Q9UHC6 1331 aa6.18□□□□□ -1.42
YBX3-210ENST00000540975 WNT9BO14905 357 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 EIF5BO60841 1220 aaKnown RBP6.17□□□□□ -1.42
YBX3-210ENST00000540975 TACC1O75410 805 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 HEXAP06865 529 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 HNRNPA1P09651 372 aaKnown RBP eCLIP6.17□□□□□ -1.42
YBX3-210ENST00000540975 RRP1P56182 461 aaKnown RBP6.17□□□□□ -1.42
YBX3-210ENST00000540975 UFM1P61960 85 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 ITGADQ13349 1161 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 VEPH1Q14D04 833 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 XKR9Q5GH70 373 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 C9orf57Q5W0N0 161 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 TMEM81Q6P7N7 255 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 CPLX2Q6PUV4 134 aaKnown RBP6.17□□□□□ -1.42
YBX3-210ENST00000540975 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.17□□□□□ -1.42
YBX3-210ENST00000540975 ZNF114Q8NC26 417 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 SMRP1Q8NCR6 262 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 MMTAG2Q9BU76 263 aaKnown RBP6.17□□□□□ -1.42
YBX3-210ENST00000540975 C1QTNF4Q9BXJ3 329 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 HEMGNQ9BXL5 484 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 NUF2Q9BZD4 464 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 HSPB7Q9UBY9 170 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 TBX20Q9UMR3 447 aa6.17□□□□□ -1.42
YBX3-210ENST00000540975 IGLV5-37A0A075B6J1 123 aa6.16□□□□□ -1.42
YBX3-210ENST00000540975 TNPO2O14787 897 aaKnown RBP6.16□□□□□ -1.42
YBX3-210ENST00000540975 NDUFB4O95168 129 aa6.16□□□□□ -1.42
YBX3-210ENST00000540975 SSTR2P30874 369 aa6.16□□□□□ -1.42
YBX3-210ENST00000540975 RPP30P78346 268 aaKnown RBP6.16□□□□□ -1.42
YBX3-210ENST00000540975 DDR1Q08345 913 aa6.16□□□□□ -1.42
YBX3-210ENST00000540975 MYBPHQ13203 477 aa6.16□□□□□ -1.42
YBX3-210ENST00000540975 SLC39A14Q15043 492 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms