RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 MANEAQ5SRI9 462 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 TMEM81Q6P7N7 255 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 NCEH1Q6PIU2 408 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 TRAPPC11Q7Z392 1133 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 MDGA2Q7Z553 956 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 TECPR1Q7Z6L1 1165 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 KLBQ86Z14 1044 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 GALNT13Q8IUC8 556 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 TEX11Q8IYF3 940 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 SAMD14Q8IZD0 417 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 MMP21Q8N119 569 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 TMEM116Q8NCL8 245 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 SETD9Q8NE22 299 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 CADM4Q8NFZ8 388 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 SCFD2Q8WU76 684 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 CNOT9Q92600 299 aaKnown RBP3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 ADAD1Q96M93 576 aaKnown RBP3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 TTC14Q96N46 770 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 CD180Q99467 661 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 WDR83Q9BRX9 315 aaKnown RBP3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 FOXP1Q9H334 677 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 TASP1Q9H6P5 420 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 CCDC177Q9NQR7 707 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 THSD1Q9NS62 852 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 C20orf141Q9NUB4 165 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 PPP1R14DQ9NXH3 145 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 HCN3Q9P1Z3 774 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 PEMTQ9UBM1 199 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 CFDP1Q9UEE9 299 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 INTS6Q9UL03 887 aaKnown RBP3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 LAMP3Q9UQV4 416 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 OSGIN2Q9Y236 505 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 TMEM5Q9Y2B1 443 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 DTX4Q9Y2E6 619 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 LYVE1Q9Y5Y7 322 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 RPGRIP1LQ68CZ1 1315 aa3.12□□□□□ -1.91
HMGB1P9-201ENST00000429856 TMEM247A6NEH6 219 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 MYMKA6NI61 221 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 RHODO00212 210 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CEP104O60308 925 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CCNT1O60563 726 aaKnown RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 ZC3H11AO75152 810 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CCNDBP1O95273 360 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 HLA-DQA2P01906 255 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 WNT1P04628 370 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 EIF2S1P05198 315 aaKnown RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CYP4B1P13584 511 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 SELLP14151 372 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 COX7A2P14406 83 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 TBXAS1P24557 533 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CCKARP32238 428 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 PSMB10P40306 273 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 RPL7AP62424 266 aaKnown RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 OLR1P78380 273 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 ALKBH1Q13686 389 aaKnown RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 INPP5JQ15735 1006 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 SLC18A3Q16572 532 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 TMEM266Q2M3C6 531 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 SMTNL2Q2TAL5 461 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 ARL13AQ5H913 290 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 C6orf10Q5SRN2 563 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 NUGGCQ68CJ6 796 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 KIAA0930Q6ICG6 404 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CDC73Q6P1J9 531 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 GJB7Q6PEY0 223 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 KLHL35Q6PF15 583 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 MOB3CQ70IA8 216 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CHST9Q7L1S5 443 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 KRT74Q7RTS7 529 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 ADGRA1Q86SQ6 560 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 PRPF39Q86UA1 669 aaKnown RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 TMEM200AQ86VY9 491 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 VSIG1Q86XK7 387 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 ZDHHC17Q8IUH5 632 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CEP97Q8IW35 865 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 RPAP2Q8IXW5 612 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 TAGAPQ8N103 731 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 NRACQ8N912 160 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 TNIP2Q8NFZ5 429 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 FAM110DQ8TAY7 271 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CMTM3Q96MX0 182 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 SRSF8Q9BRL6 282 aaKnown RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 DESI2Q9BSY9 194 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 FRMD8Q9BZ67 464 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 OR10A4Q9H209 315 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 TTC12Q9H892 705 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 MPP6Q9NZW5 540 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 CTNNAL1Q9UBT7 734 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 SLC25A13Q9UJS0 675 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 UTS2RQ9UKP6 389 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 FBXO4Q9UKT5 387 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 ZHX1Q9UKY1 873 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 PKP3Q9Y446 797 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 LRP12Q9Y561 859 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 FAM169AQ9Y6X4 670 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 PASKQ96RG2 1323 aa3.11□□□□□ -1.91
HMGB1P9-201ENST00000429856 A0A0G2JK05 382 aa3.1□□□□□ -1.91
HMGB1P9-201ENST00000429856 IGLV5-39A0A0G2JS06 123 aa3.1□□□□□ -1.91
HMGB1P9-201ENST00000429856 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms