RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 FECHP22830 423 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 RPA3P35244 121 aaPredicted RBP11.49□□□□□ -0.57
SNX13-202ENST00000409604 NAGLUP54802 743 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 TPD52P55327 224 aaPredicted RBP11.49□□□□□ -0.57
SNX13-202ENST00000409604 PRKG2Q13237 762 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 SEMA5AQ13591 1074 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 PFKFB4Q16877 469 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 TRNP1Q6NT89 227 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 NPWQ8N729 165 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 MRPL43Q8N983 215 aaKnown RBP11.49□□□□□ -0.57
SNX13-202ENST00000409604 ELMO1Q92556 727 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 LRRC37BQ96QE4 947 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 SRPK1Q96SB4 655 aaKnown RBP11.49□□□□□ -0.57
SNX13-202ENST00000409604 FOXP3Q9BZS1 431 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 DRC3Q9H069 523 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 SUN2Q9UH99 717 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 FKBPLQ9UIM3 349 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 DOCK5Q9H7D0 1870 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 A6NNZ2 444 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 HEPACAM2A8MVW5 462 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 MATN3O15232 486 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 TIMM44O43615 452 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 BAIAP3O94812 1187 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ANP32DO95626 131 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 HALP42357 657 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 RFX3P48380 749 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 NPY2RP49146 381 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 TUBB8Q3ZCM7 444 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 CLDN19Q8N6F1 224 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 OSER1Q9NX31 292 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 CLIC5Q9NZA1 410 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 KLHL3Q9UH77 587 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ZFP69BQ9UJL9 534 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 V9GYQ6 96 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 CACNA1EQ15878 2313 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ATP6AP2A0A1C7CYW4 349 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 A0A1W2PQ67 120 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 FFAR2O15552 330 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ATP6AP2O75787 350 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 HOXD8P13378 290 aaPredicted RBP11.48□□□□□ -0.57
SNX13-202ENST00000409604 FOSL2P15408 326 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ZNF7P17097 686 aaPredicted RBP11.48□□□□□ -0.57
SNX13-202ENST00000409604 LPOP22079 712 aaPredicted RBP11.48□□□□□ -0.57
SNX13-202ENST00000409604 ERVK-21P61565 698 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 CRYMQ14894 314 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 TCEAL5Q5H9L2 206 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 AGAP9Q5VTM2 703 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ALKAL1Q6UXT8 129 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ZNF662Q6ZS27 426 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 MYO1HQ8N1T3 1032 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 KIF2BQ8N4N8 673 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 CPA6Q8N4T0 437 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 OR8D1Q8WZ84 308 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 PRCCQ92733 491 aaPredicted RBP11.48□□□□□ -0.57
SNX13-202ENST00000409604 TMBIM4Q9HC24 238 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ADA2Q9NZK5 511 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 SLC2A6Q9UGQ3 507 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 RAB21Q9UL25 225 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 RREB1Q92766 1687 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 CHADO15335 359 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ADH5P11766 374 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 CPA3P15088 417 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 FGFR3P22607 806 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 GMPRP36959 345 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 PIK3CGP48736 1102 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 DGKEP52429 567 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 CCDC15Q0P6D6 951 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 XRCC4Q13426 336 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ACAD11Q709F0 780 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 APCDD1Q8J025 514 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ANKLE1Q8NAG6 615 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 HNRNPLLQ8WVV9 542 aaKnown RBP11.48□□□□□ -0.57
SNX13-202ENST00000409604 ART4Q93070 314 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 NKD2Q969F2 451 aaPredicted RBP11.48□□□□□ -0.57
SNX13-202ENST00000409604 TEKT5Q96M29 485 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 SLC46A2Q9BY10 475 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 ZNF334Q9HCZ1 680 aaPredicted RBP11.48□□□□□ -0.57
SNX13-202ENST00000409604 CCL26Q9Y258 94 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 FER1L6Q2WGJ9 1857 aa11.48□□□□□ -0.57
SNX13-202ENST00000409604 E9PBE3 544 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 INSIG1O15503 277 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 MEFVO15553 781 aaPredicted RBP11.47□□□□□ -0.57
SNX13-202ENST00000409604 KLHL41O60662 606 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 CDK14O94921 469 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 PCCBP05166 539 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 VAV1P15498 845 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 ECT2LQ008S8 904 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 TTLL9Q3SXZ7 439 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 PARP15Q460N3 678 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 ANKRD20A4Q4UJ75 823 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 VITQ6UXI7 678 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 TRIM74Q86UV6 250 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 ARFGAP1Q8N6T3 406 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 TUBGCP3Q96CW5 907 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 QKIQ96PU8 341 aaKnown RBP eCLIP11.47□□□□□ -0.574e-7■■■■□ 25.6
SNX13-202ENST00000409604 FRMD8Q9BZ67 464 aaPredicted RBP11.47□□□□□ -0.57
SNX13-202ENST00000409604 SEMA4BQ9NPR2 832 aaPredicted RBP11.47□□□□□ -0.57
SNX13-202ENST00000409604 TAS2R13Q9NYV9 303 aa11.47□□□□□ -0.57
SNX13-202ENST00000409604 SMG5Q9UPR3 1016 aaKnown RBP11.47□□□□□ -0.57
SNX13-202ENST00000409604 NUP205Q92621 2012 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms