RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 VPS45Q9NRW7 570 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 NFKBIL1Q9UBC1 381 aaPredicted RBP18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 VPS51Q9UID3 782 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ZNF541Q9H0D2 1346 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 CARNS1A5YM72 827 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ATP6V1C1P21283 382 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 USP4Q13107 963 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 SDHAF4Q5VUM1 108 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ZDHHC24Q6UX98 284 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ANKRD23Q86SG2 305 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 MPP4Q96JB8 637 aa18.83■□□□□ 0.6
CNTNAP3B-203ENST00000377561 HS6ST1O60243 411 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 GRIA3P42263 894 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 INTS6LQ5JSJ4 861 aaKnown RBP18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 PPP1R14AQ96A00 147 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ROGDIQ9GZN7 287 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 FZD8Q9H461 694 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ZDHHC18Q9NUE0 388 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ARFGEF2Q9Y6D5 1785 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 BMP10O95393 424 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 PIGRP01833 764 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 HNRNPLP14866 589 aaKnown RBP eCLIP18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 CES1P23141 567 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 GTF2E2P29084 291 aaKnown RBP18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 NRF1Q16656 503 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 PTCD3Q96EY7 689 aaKnown RBP18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ADPRHL2Q9NX46 363 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ETAA1Q9NY74 926 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 OR6C75A6NL08 312 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 COL6A2P12110 1019 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ASPAP45381 313 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 RAB14P61106 215 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 FAM187BQ17R55 369 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 TXNDC11Q6PKC3 985 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 FBXW8Q8N3Y1 598 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 FITM2Q8N6M3 262 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 DPF3Q92784 378 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 TMEM39AQ9NV64 488 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 A8MX80 341 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 LPOP22079 712 aaPredicted RBP18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ACSM2AQ08AH3 577 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ACSM2BQ68CK6 577 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 OR4L1Q8NH43 312 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 APOL4Q9BPW4 351 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 TRMOQ9BU70 441 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 PACSIN3Q9UKS6 424 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 SLC27A5Q9Y2P5 690 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 CD3EAPO15446 510 aaKnown RBP18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 GSC2O15499 205 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 PEX1O43933 1283 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ATG7O95352 703 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ABCB1P08183 1280 aaPredicted RBP18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 IKBKEQ14164 716 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ACOX1Q15067 660 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 SYT12Q8IV01 421 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 CLYBLQ8N0X4 340 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ZNF276Q8N554 614 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 OR52K2Q8NGK3 314 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 IRGQQ8WZA9 623 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 MAML3Q96JK9 1138 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 SNX27Q96L92 541 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 NMUR2Q9GZQ4 415 aa18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 SENP6Q9GZR1 1112 aaPredicted RBP18.82■□□□□ 0.6
CNTNAP3B-203ENST00000377561 LINC00854A0A1B0GVQ3 168 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 GSTA3Q16772 222 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 FAM13CQ8NE31 585 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 HNRNPABQ99729 332 aaKnown RBP18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 RTKNQ9BST9 563 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ARHGEF4Q9NR80 690 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 KDM3BQ7LBC6 1761 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 FOXO6A8MYZ6 492 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 DHX15O43143 795 aaKnown RBP18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 PEX10O60683 326 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 HSMCR30P0CW71 290 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 HGFP14210 728 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 SNRPD1P62314 119 aaKnown RBP18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ARMCX4Q5H9R4 360 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 TPGS1Q6ZTW0 290 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 TTC7BQ86TV6 843 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 CLVS1Q8IUQ0 354 aaPredicted RBP18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 SVOPQ8N4V2 548 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 NIPA2Q8N8Q9 360 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 SELENOMQ8WWX9 145 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 MRPL17Q9NRX2 175 aaKnown RBP18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 AZIN1O14977 448 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 TLR5O60602 858 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 FAM20BO75063 409 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 AP2A1O95782 977 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 C4BPBP20851 252 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 TAF5Q15542 800 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 RD3Q7Z3Z2 195 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 NDRG1Q92597 394 aaKnown RBP18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ZNF516Q92618 1163 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 BCL10O95999 233 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 FGFR3P22607 806 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 TALDO1P37837 337 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 GPR15P49685 360 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 PPM1LQ5SGD2 360 aa18.81■□□□□ 0.6
CNTNAP3B-203ENST00000377561 ATAD3BQ5T9A4 648 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms