RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ANKRD20A8PQ5CZ79 823 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 PIP4P1Q86T03 277 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 SRLQ86TD4 932 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 CAMK1DQ8IU85 385 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 CXorf40AQ8TE69 158 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 RHBDD1Q8TEB9 315 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 TUBGCP5Q96RT8 1024 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZNF670Q9BS34 389 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 WRAP53Q9BUR4 548 aaKnown RBP13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 SUV39H2Q9H5I1 410 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 GGT7Q9UJ14 662 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 INTUQ9ULD6 942 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 DOCK9Q9BZ29 2069 aa13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 TP53BP1Q12888 1972 aaPredicted RBP13.12□□□□□ -0.31
CTDSPL2-209ENST00000560620 FLRT2O43155 660 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 MAFKO60675 156 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 MMP20O60882 483 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 MAP3K6O95382 1288 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 ITGAVP06756 1048 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 THEGLP0DJG4 465 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 RGRP47804 291 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 NXPH1P58417 271 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 ITKQ08881 620 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 ELP6Q0PNE2 266 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 OVGP1Q12889 678 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 HNRNPDQ14103 355 aaKnown RBP13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 TRIP6Q15654 476 aaKnown RBP13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZNF423Q2M1K9 1284 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 INAVAQ3KP66 663 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 TMEM259Q4ZIN3 620 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 MARC1Q5VT66 337 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 ERAP2Q6P179 960 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 PTAR1Q7Z6K3 402 aaPredicted RBP13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 IQCHQ86VS3 1027 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 PDCD6IPQ8WUM4 868 aaKnown RBP13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 TSC1Q92574 1164 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZNF641Q96N77 438 aaPredicted RBP13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 MAK16Q9BXY0 300 aaKnown RBP13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 DKK3Q9UBP4 350 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 TTLL3Q9Y4R7 772 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 TRPM6Q9BX84 2022 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 SHROOM3Q8TF72 1996 aa13.11□□□□□ -0.31
CTDSPL2-209ENST00000560620 SPTBN2O15020 2390 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 A0A1B0GTQ1 180 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 TTC24A2A3L6 582 aaPredicted RBP13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 GOLGA8CPA6NN73 597 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 A6NNZ2 444 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 C10orf142B7Z368 130 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 FPGTO14772 594 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 MFSD11O43934 449 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 KRT1P04264 644 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 TIMP2P16035 220 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 ITIH2P19823 946 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 KDELR1P24390 212 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 IL4RP24394 825 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 SLC1A1P43005 524 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 GRK6P43250 576 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 MMP13P45452 471 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 CSNK1DP48730 415 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 ARSEP51690 589 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 NAP1L1P55209 391 aaKnown RBP13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 FAM193AP78312 1265 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 NSUN2Q08J23 767 aaKnown RBP eCLIP13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 UGP2Q16851 508 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 NCBP2-AS2Q69YL0 99 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 BRAT1Q6PJG6 821 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZSCAN30Q86W11 494 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 GATAD2AQ86YP4 633 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 LRRC49Q8IUZ0 686 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 RHOT1Q8IXI2 618 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 OXR1Q8N573 874 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 SPC24Q8NBT2 197 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 CCNYQ8ND76 341 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 PCDH19Q8TAB3 1148 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 RAPGEF5Q92565 580 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 ZNF830Q96NB3 372 aaPredicted RBP13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 PSKH2Q96QS6 385 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 C1QTNF7Q9BXJ2 289 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 SCUBE2Q9NQ36 999 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 PCOLCE2Q9UKZ9 415 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 TFR2Q9UP52 801 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 HYOU1Q9Y4L1 999 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 PCDHGB2Q9Y5G2 931 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 PCDHA13Q9Y5I0 950 aa13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
CTDSPL2-209ENST00000560620 CACNA1AO00555 2505 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 SOWAHDA6NJG2 315 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 MUSKO15146 869 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 YKT6O15498 198 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 BUB1BO60566 1050 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 TM7SF2O76062 418 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 MTA2O94776 668 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 PRKCGP05129 697 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 COMTP21964 271 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms