RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 LACRTQ9GZZ8 138 aa16.88■□□□□ 0.29
SNCA-209ENST00000506244 GOLPH3Q9H4A6 298 aa16.88■□□□□ 0.29
SNCA-209ENST00000506244 AASDHPPTQ9NRN7 309 aa16.88■□□□□ 0.29
SNCA-209ENST00000506244 DTLQ9NZJ0 730 aa16.88■□□□□ 0.29
SNCA-209ENST00000506244 AMACRQ9UHK6 382 aa16.88■□□□□ 0.29
SNCA-209ENST00000506244 FADS3Q9Y5Q0 445 aa16.88■□□□□ 0.29
SNCA-209ENST00000506244 A0A1W2PQ67 120 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 A0A1W2PQU0 124 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 CCDC66A2RUB6 948 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 PPP1R12AO14974 1030 aaPredicted RBP16.87■□□□□ 0.29
SNCA-209ENST00000506244 ZRANB2O95218 330 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNCA-209ENST00000506244 PIGNO95427 931 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 PEX11BO96011 259 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 CCNCP24863 283 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 NFKBIAP25963 317 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 MAT2AP31153 395 aaKnown RBP16.87■□□□□ 0.29
SNCA-209ENST00000506244 CTNNA1P35221 906 aaKnown RBP16.87■□□□□ 0.29
SNCA-209ENST00000506244 SCNN1BP51168 640 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 C21orf59P57076 290 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 GBE1Q04446 702 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 PDK1Q15118 436 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 TFDP3Q5H9I0 405 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 RCOR2Q8IZ40 523 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 PLD5Q8N7P1 536 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 EXD1Q8NHP7 514 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 RMDN1Q96DB5 314 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 FEM1CQ96JP0 617 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 SLC6A18Q96N87 628 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 NUDCD1Q96RS6 583 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 ORAI3Q9BRQ5 295 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 BRD8Q9H0E9 1235 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 SUV39H2Q9H5I1 410 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 SCUBE2Q9NQ36 999 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 RXFP3Q9NSD7 469 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 DLL3Q9NYJ7 618 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 SALL4Q9UJQ4 1053 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 HEY1Q9Y5J3 304 aa16.87■□□□□ 0.29
SNCA-209ENST00000506244 MACROD2A1Z1Q3 448 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 UPK3BL1B0FP48 263 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 UPK3BL2E5RIL1 263 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 PRAMEF26H0Y7S4 382 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 RNF103O00237 685 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 MATN3O15232 486 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 INSIG1O15503 277 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 KRT86O43790 486 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 MAGEC1O60732 1142 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 OPHN1O60890 802 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 SOCS5O75159 536 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 TGM2P21980 687 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 CD38P28907 300 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 AKT2P31751 481 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 CETN2P41208 172 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 ABL2P42684 1182 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 CDKN2BP42772 138 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 RGRP47804 291 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 NR2C2P49116 596 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 PPP2R5EQ16537 467 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 ERAP2Q6P179 960 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 MFSD7Q6UXD7 560 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 SPOCD1Q6ZMY3 1216 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 TTC7BQ86TV6 843 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 IQCHQ86VS3 1027 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 CCDC13Q8IYE1 715 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 MINDY1Q8N5J2 469 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 CCNYQ8ND76 341 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 MAML1Q92585 1016 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 ANP32BQ92688 251 aaKnown RBP16.86■□□□□ 0.29
SNCA-209ENST00000506244 POLR1EQ9GZS1 481 aaKnown RBP16.86■□□□□ 0.29
SNCA-209ENST00000506244 DUSP10Q9Y6W6 482 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 PLXNA2O75051 1894 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 SHROOM3Q8TF72 1996 aa16.86■□□□□ 0.29
SNCA-209ENST00000506244 A0A1B0GVT2 93 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 C4orf47A7E2U8 309 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 MUSKO15146 869 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 VILLO15195 856 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 MAP3K6O95382 1288 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 HNRNPA2B1P22626 353 aaKnown RBP16.85■□□□□ 0.29
SNCA-209ENST00000506244 CES1P23141 567 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 CTNNA2P26232 953 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 CSNK1EP49674 416 aaKnown RBP16.85■□□□□ 0.29
SNCA-209ENST00000506244 COPS2P61201 443 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 POLR2LP62875 67 aaKnown RBP16.85■□□□□ 0.29
SNCA-209ENST00000506244 DYNLT1P63172 113 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
SNCA-209ENST00000506244 OVGP1Q12889 678 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 STAT4Q14765 748 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 TAZQ16635 292 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 TMEM259Q4ZIN3 620 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 CAMK1DQ8IU85 385 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 RNF10Q8N5U6 811 aaKnown RBP16.85■□□□□ 0.29
SNCA-209ENST00000506244 TEX26Q8N6G2 289 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 LRRC57Q8N9N7 239 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 FAM174AQ8TBP5 190 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 CXorf40AQ8TE69 158 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 VOPP1Q96AW1 172 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 C1QTNF7Q9BXJ2 289 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 NT5MQ9NPB1 228 aa16.85■□□□□ 0.29
SNCA-209ENST00000506244 DNAAF2Q9NVR5 837 aaKnown RBP16.85■□□□□ 0.29
SNCA-209ENST00000506244 ANKRD6Q9Y2G4 727 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms