RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ZBTB9Q96C00 473 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 KLHL29Q96CT2 875 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 CAMK1GQ96NX5 476 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 NR1H4Q96RI1 486 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 MSTO1Q9BUK6 570 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 GLIS2Q9BZE0 524 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 RBM38Q9H0Z9 239 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 UNC45AQ9H3U1 944 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 CATSPERBQ9H7T0 1116 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 MPP6Q9NZW5 540 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 RAI2Q9Y5P3 530 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 TNFRSF18Q9Y5U5 241 aa4.23□□□□□ -1.73
TOPBP1-204ENST00000505804 HSPB2A8KAH6 182 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 B4E171 279 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 RGS14O43566 566 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 TBX18O95935 607 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 GNLYP22749 145 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 ABCD1P33897 745 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 DDIT3P35638 169 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 TSPAN7P41732 249 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 RFX2P48378 723 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 FAM27E3Q08E93 113 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 NEXNQ0ZGT2 675 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 GPS2Q13227 327 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 MYBPC2Q14324 1141 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 ARHGEF6Q15052 776 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 PPP2R5BQ15173 497 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 HSPB2Q16082 182 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 TSTQ16762 297 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 SOWAHAQ2M3V2 549 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 FNBP1LQ5T0N5 605 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 OTUD1Q5VV17 481 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 DAB2IPQ5VWQ8 1189 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 LRRC8EQ6NSJ5 796 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 INO80CQ6PI98 192 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 CPLX2Q6PUV4 134 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 ATF7IPQ6VMQ6 1270 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 MON1BQ7L1V2 547 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 MAATS1Q7Z4T9 603 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 CNTROBQ8N137 903 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 PELI3Q8N2H9 469 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 GJC3Q8NFK1 279 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 TMEM163Q8TC26 289 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 NSMCE1Q8WV22 266 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 OIT3Q8WWZ8 545 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 ZC3HAV1LQ96H79 300 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 PDCL3Q9H2J4 239 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 SMC4Q9NTJ3 1288 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 ANKRD10Q9NXR5 420 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 PTGDR2Q9Y5Y4 395 aa4.22□□□□□ -1.73
TOPBP1-204ENST00000505804 KDM3AQ9Y4C1 1321 aa4.21□□□□□ -1.73
TOPBP1-204ENST00000505804 CACNA1IQ9P0X4 2223 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 KDM4EB2RXH2 506 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 INAFM1C9JVW0 142 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 SNAP23O00161 211 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 LDLRAD4O15165 306 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 TGFB1I1O43294 461 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 ITM2AO43736 263 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 RGS11O94810 467 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 SEC31AO94979 1220 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 CBSLP0DN79 551 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 PCNAP12004 261 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 LMO1P25800 156 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 CBSP35520 551 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 CTCFP49711 727 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 GNAQP50148 359 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 CCR9P51686 369 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 HDAC4P56524 1084 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 LINC00205P59089 165 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 GRIK3Q13003 919 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 HNF4GQ14541 408 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 FSCBQ5H9T9 825 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 DNTTIP2Q5QJE6 756 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 TXNDC8Q6A555 127 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 ZNF549Q6P9A3 640 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 NOXA1Q86UR1 476 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 TDRPQ86YL5 185 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 DHX40Q8IX18 779 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 MB21D2Q8IYB1 491 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 PARP16Q8N5Y8 322 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 MIGA1Q8NAN2 632 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 METTL6Q8TCB7 284 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 UCMAQ8WVF2 138 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 SAAL1Q96ER3 474 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 BBS4Q96RK4 519 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 TAS2R10Q9NYW0 307 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 A4GNTQ9UNA3 340 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 CARD8Q9Y2G2 431 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 FAM96BQ9Y3D0 163 aa4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 SRPRBQ9Y5M8 271 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-204ENST00000505804 OR6C75A6NL08 312 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 NPIPB11E5RHQ5 1161 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 SPRY3O43610 288 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 NAGAP17050 411 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 HOXA11P31270 313 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 ARRB2P32121 409 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 ICAM3P32942 547 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 CPOXP36551 454 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 RGS2P41220 211 aa4.2□□□□□ -1.74
TOPBP1-204ENST00000505804 ABATP80404 500 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms