RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 EIF4A3P38919 411 aaKnown RBP14.16□□□□□ -0.14
VARS-227ENST00000489979 PTK2Q05397 1052 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 ACBD5Q5T8D3 534 aaPredicted RBP14.16□□□□□ -0.14
VARS-227ENST00000489979 ZDHHC17Q8IUH5 632 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 PLPP6Q8IY26 295 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 FSTL5Q8N475 847 aaPredicted RBP14.16□□□□□ -0.14
VARS-227ENST00000489979 PCDH19Q8TAB3 1148 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 SCG3Q8WXD2 468 aaKnown RBP14.16□□□□□ -0.14
VARS-227ENST00000489979 VOPP1Q96AW1 172 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 ISG20Q96AZ6 181 aaKnown RBP14.16□□□□□ -0.14
VARS-227ENST00000489979 ARHGEF26Q96DR7 871 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 KLHL32Q96NJ5 620 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 APEX2Q9UBZ4 518 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 PISDQ9UG56 409 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 ACSL6Q9UKU0 697 aa14.16□□□□□ -0.14
VARS-227ENST00000489979 AGRPO00253 132 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 KRIT1O00522 736 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 TM7SF2O76062 418 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 JMJD7P0C870 316 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 LIPCP11150 499 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 BLKP51451 505 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 ELOCQ15369 112 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 SLC25A52Q3SY17 297 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 MANEAQ5SRI9 462 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 TTC7BQ86TV6 843 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 VASH2Q86V25 355 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 SLC47A2Q86VL8 602 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 HID1Q8IV36 788 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 TP53I13Q8NBR0 393 aaPredicted RBP14.15□□□□□ -0.14
VARS-227ENST00000489979 CXorf40AQ8TE69 158 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 TSACCQ96A04 125 aaPredicted RBP14.15□□□□□ -0.14
VARS-227ENST00000489979 TMEM74Q96NL1 305 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 HAPLN3Q96S86 360 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 EPAS1Q99814 870 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 EDEM3Q9BZQ6 932 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 LRRN3Q9H3W5 708 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 GPR34Q9UPC5 381 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 LOXL2Q9Y4K0 774 aa14.15□□□□□ -0.14
VARS-227ENST00000489979 LRRK1Q38SD2 2015 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 LRP4O75096 1905 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 FAM170AA1A519 330 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 TOR1BO14657 336 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 NVLO15381 856 aaKnown RBP14.14□□□□□ -0.15
VARS-227ENST00000489979 POP4O95707 220 aaKnown RBP14.14□□□□□ -0.15
VARS-227ENST00000489979 GSRP00390 522 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 ALPIP09923 528 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 SFTPCP11686 197 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 CTSEP14091 401 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 ITIH2P19823 946 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 ITIH1P19827 911 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 CCKBRP32239 447 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 CLCN1P35523 988 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 HK3P52790 923 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 SNRPD1P62314 119 aaKnown RBP14.14□□□□□ -0.15
VARS-227ENST00000489979 PAK1Q13153 545 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 POLD3Q15054 466 aaPredicted RBP14.14□□□□□ -0.15
VARS-227ENST00000489979 IRF4Q15306 451 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 TBR1Q16650 682 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 KLHL40Q2TBA0 621 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 MYLK3Q32MK0 819 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 ATXN7L2Q5T6C5 722 aaPredicted RBP14.14□□□□□ -0.15
VARS-227ENST00000489979 FAM102AQ5T9C2 384 aaPredicted RBP14.14□□□□□ -0.15
VARS-227ENST00000489979 LVRNQ6Q4G3 990 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 LEKR1Q6ZMV7 388 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 GBP6Q6ZN66 633 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 FAM131BQ86XD5 332 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 CREBRFQ8IUR6 639 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 OR2AP1Q8NGE2 309 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 ARHGEF2Q92974 986 aaKnown RBP14.14□□□□□ -0.15
VARS-227ENST00000489979 C1QTNF7Q9BXJ2 289 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 OSBPL1AQ9BXW6 950 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 NDFIP2Q9NV92 336 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 TMEM51Q9NW97 253 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 SEPT10Q9P0V9 454 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 PPARGC1AQ9UBK2 798 aaKnown RBP14.14□□□□□ -0.15
VARS-227ENST00000489979 AJAP1Q9UKB5 411 aaPredicted RBP14.14□□□□□ -0.15
VARS-227ENST00000489979 PCDHGA4Q9Y5G9 962 aa14.14□□□□□ -0.15
VARS-227ENST00000489979 PRAMEF33A0A0G2JMD5 474 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 BIN1O00499 593 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 PRAMEF10O60809 474 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 PNMA6AP0CW24 399 aaPredicted RBP14.13□□□□□ -0.15
VARS-227ENST00000489979 PON1P27169 355 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 FLT3P36888 993 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 CYP4F2P78329 520 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 MORC3Q14149 939 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 EXOC3L4Q17RC7 722 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 ALG11Q2TAA5 492 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 TRNP1Q6NT89 227 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 ENPP7Q6UWV6 458 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 GDPD4Q6W3E5 623 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 ZNF574Q6ZN55 896 aaPredicted RBP14.13□□□□□ -0.15
VARS-227ENST00000489979 NYAP1Q6ZVC0 841 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 RD3Q7Z3Z2 195 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 ZFAND4Q86XD8 727 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 GKN2Q86XP6 184 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 Q8N9G6 341 aaPredicted RBP14.13□□□□□ -0.15
VARS-227ENST00000489979 C18orf8Q96DM3 657 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 SEMA3CQ99985 751 aa14.13□□□□□ -0.15
VARS-227ENST00000489979 WRAP53Q9BUR4 548 aaKnown RBP14.13□□□□□ -0.15
VARS-227ENST00000489979 DNAI1Q9UI46 699 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms