RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 NLRC5Q86WI3 1866 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 TRIM38O00635 465 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 AURKAO14965 403 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 RNASEH2AO75792 299 aaKnown RBP12.87□□□□□ -0.35
CTPS1-202ENST00000372621 RPL5P46777 297 aaKnown RBP12.87□□□□□ -0.35
CTPS1-202ENST00000372621 GEMP55040 296 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 CDKL1Q00532 357 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 TECRLQ5HYJ1 363 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 AFMIDQ63HM1 303 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 GK5Q6ZS86 529 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 BEND5Q7L4P6 421 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 METTL25Q8N6Q8 603 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 TMA16Q96EY4 203 aaKnown RBP12.87□□□□□ -0.35
CTPS1-202ENST00000372621 SLC2A11Q9BYW1 496 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 MEAF6Q9HAF1 191 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 NDFIP2Q9NV92 336 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 LZTS1Q9Y250 596 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 DNAH12Q6ZR08 3092 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 NEMP2A6NFY4 417 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 KCNU1A8MYU2 1149 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 VILLO15195 856 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 HLA-DQB2P05538 268 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 HNRNPLP14866 589 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 KCNA5P22460 613 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 PFKPQ01813 784 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 LRP8Q14114 963 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 PTK2BQ14289 1009 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 CCL15Q16663 113 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 ZNF470Q6ECI4 717 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 ZNF280DQ6N043 979 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 ANKRD23Q86SG2 305 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 FAM156AQ8NDB6 213 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 RNF34Q969K3 372 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 DGCR14Q96DF8 476 aaKnown RBP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 GAD1Q99259 594 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 PAAF1Q9BRP4 392 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 TRPV6Q9H1D0 765 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 SUCOQ9UBS9 1254 aaKnown RBP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 FBXO5Q9UKT4 447 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 A0A1B0GVG6 124 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 THP07101 528 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 C8BP07358 591 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 CPB1P15086 417 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 ZNF26P17031 533 aaPredicted RBP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 CHRNA4P43681 627 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 SLC14A2Q15849 920 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 RBM20Q5T481 1227 aaKnown RBP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 BTBD8Q5XKL5 378 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 SPATA24Q86W54 205 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 SGF29Q96ES7 293 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 PKMYT1Q99640 499 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 RBM38Q9H0Z9 239 aaKnown RBP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 ETAA1Q9NY74 926 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 C17orf102A2RUQ5 167 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 FBP2O00757 339 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 TRIM24O15164 1050 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 IRAK2O43187 625 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 CLPTM1O96005 669 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 ZNF865P0CJ78 1059 aaPredicted RBP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 PCSK1P29120 753 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 HTR7P34969 479 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 HSPA13P48723 471 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 C1QTNF8P60827 252 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 PSME3P61289 254 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 IRF5Q13568 498 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 APOFQ13790 326 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 TRIM25Q14258 630 aaKnown RBP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 TIGD5Q53EQ6 642 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 KIAA0408Q6ZU52 694 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 LZTR1Q8N653 840 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 PPP1R2P1Q96PQ5 205 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 OLFM1Q99784 485 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 MRPL1Q9BYD6 325 aaKnown RBP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 MRPS26Q9BYN8 205 aaKnown RBP12.86□□□□□ -0.35
CTPS1-202ENST00000372621 SIK2Q9H0K1 926 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 FAM105AQ9NUU6 356 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
CTPS1-202ENST00000372621 FGF10O15520 208 aaPredicted RBP12.85□□□□□ -0.35
CTPS1-202ENST00000372621 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 ARSAP15289 507 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 PAMP19021 973 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 BDNFP23560 247 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 KPNA2P52292 529 aaKnown RBP12.85□□□□□ -0.35
CTPS1-202ENST00000372621 ATXN3P54252 364 aaPredicted RBP12.85□□□□□ -0.35
CTPS1-202ENST00000372621 PSMD5Q16401 504 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 UPP1Q16831 310 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 ZNF789Q5FWF6 425 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 C6orf52Q5T4I8 152 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 IL23RQ5VWK5 629 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 TOP1MTQ969P6 601 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 CNBD2Q96M20 576 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 NDNQ99608 321 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 UNC93B1Q9H1C4 597 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 TMLHEQ9NVH6 421 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 CACNA2D2Q9NY47 1150 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 A8MT66 165 aa12.85□□□□□ -0.35
CTPS1-202ENST00000372621 E7ENX8 843 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms