RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 DKK3Q9UBP4 350 aa12.7□□□□□ -0.38
CLNS1A-201ENST00000263309 HCN2Q9UL51 889 aa12.7□□□□□ -0.38
CLNS1A-201ENST00000263309 PHTF1Q9UMS5 762 aa12.7□□□□□ -0.38
CLNS1A-201ENST00000263309 INVSQ9Y283 1065 aa12.7□□□□□ -0.38
CLNS1A-201ENST00000263309 IGHV1OR15-9A0A0B4J2B8 117 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 C16orf96A6NNT2 1141 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 E7EVH7 732 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 CES2O00748 559 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 DDX3YO15523 660 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 KCNN4O15554 427 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 HRO43593 1189 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 FSBPO95073 299 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 SYPP08247 313 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 PRLRP16471 622 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 RPL26P61254 145 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 RPS21P63220 83 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 OTUD4Q01804 1114 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 CREB5Q02930 508 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 STAT4Q14765 748 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 NOMO1Q15155 1222 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 P3H1Q32P28 736 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 MAP7D1Q3KQU3 841 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 ATXN7L2Q5T6C5 722 aaPredicted RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 KIAA1161Q6NSJ0 714 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 USP45Q70EL2 814 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 CPNE8Q86YQ8 564 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 SLC13A5Q86YT5 568 aaPredicted RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 REXO1L1PQ8IX06 675 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 C12orf50Q8NA57 414 aaPredicted RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 ACTL9Q8TC94 416 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 CCHCR1Q8TD31 782 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 GRK7Q8WTQ7 553 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 MAML1Q92585 1016 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 RUBCNQ92622 972 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 RMDN1Q96DB5 314 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 EXOC2Q96KP1 924 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 RUNDC3BQ96NL0 473 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 AGAP3Q96P47 875 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 SEMA3CQ99985 751 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 NUSAP1Q9BXS6 441 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 MIR1-1HGQ9H1L0 117 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 RSPH14Q9UHP6 348 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 RPL26L1Q9UNX3 145 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 DMTF1Q9Y222 760 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 SAR1BQ9Y6B6 198 aa12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 RIF1Q5UIP0 2472 aaKnown RBP12.69□□□□□ -0.38
CLNS1A-201ENST00000263309 PTPRZ1P23471 2315 aaPredicted RBP12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 BCLAF3A2AJT9 711 aaKnown RBP12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 PRR23AA6NEV1 266 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 METTL12A8MUP2 240 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 PROB1E7EW31 1015 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 KCNK1O00180 336 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 AP3B1O00203 1094 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 KHNYNO15037 678 aaKnown RBP12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 AP1G1O43747 822 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 LZTS3O60299 673 aaPredicted RBP12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 LRP3O75074 770 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 MAP3K6O95382 1288 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 CPP00450 1065 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 FGGP02679 453 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 TDGF1P13385 188 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 ADRB3P13945 408 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 VAV1P15498 845 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 AKT2P31751 481 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 MARCKSL1P49006 195 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 CCR5P51681 352 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 GEMP55040 296 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 C21orf59P57076 290 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 FAM193AP78312 1265 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 CNTN1Q12860 1018 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 CCNG2Q16589 344 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 PLK5Q496M5 336 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 KIAA0895LQ68EN5 471 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 NPNTQ6UXI9 565 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 ARHGAP36Q6ZRI8 547 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 TMEFF1Q8IYR6 380 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 SLC35F6Q8N357 371 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 CHST14Q8NCH0 376 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 OR6K2Q8NGY2 324 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 ZNF419Q96HQ0 510 aaPredicted RBP12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 MGME1Q9BQP7 344 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 FSD1LQ9BXM9 530 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 SLC25A51Q9H1U9 297 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 VPS45Q9NRW7 570 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 RAD18Q9NS91 495 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 POLR3BQ9NW08 1133 aaPredicted RBP12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 PYCARDQ9ULZ3 195 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 SMG5Q9UPR3 1016 aaKnown RBP12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 KMT2EQ8IZD2 1858 aa12.68□□□□□ -0.38
CLNS1A-201ENST00000263309 KIAA1549LQ6ZVL6 1849 aa12.67□□□□□ -0.38
CLNS1A-201ENST00000263309 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
CLNS1A-201ENST00000263309 PGRMC1O00264 195 aaKnown RBP12.67□□□□□ -0.38
CLNS1A-201ENST00000263309 ENC1O14682 589 aa12.67□□□□□ -0.38
CLNS1A-201ENST00000263309 PLRG1O43660 514 aaKnown RBP12.67□□□□□ -0.38
CLNS1A-201ENST00000263309 OPHN1O60890 802 aa12.67□□□□□ -0.38
CLNS1A-201ENST00000263309 CD160O95971 181 aa12.67□□□□□ -0.38
CLNS1A-201ENST00000263309 SDHBP21912 280 aa12.67□□□□□ -0.38
CLNS1A-201ENST00000263309 SARNPP82979 210 aaKnown RBP12.67□□□□□ -0.38
CLNS1A-201ENST00000263309 DMWDQ09019 674 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms