RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SPAG4Q9NPE6 437 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 GALNT8Q9NY28 637 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 CPA4Q9UI42 421 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 MYRFQ9Y2G1 1151 aa4.79□□□□□ -1.64
USP44-201ENST00000258499 PRRC2BQ5JSZ5 2229 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 OR51F1A6NGY5 319 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 E5RI56 91 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 E7ENX8 843 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 NDUFS3O75489 264 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 TMCC1O94876 653 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 JUNP05412 331 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 MMP3P08254 477 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 ARSAP15289 507 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 YWHAQP27348 245 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 MAP4P27816 1152 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 SLC1A2P43004 574 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 CLCNKBP51801 687 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 DAOAP59103 153 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 GK3PQ14409 553 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 PPP1R3AQ16821 1122 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 SGO1Q5FBB7 561 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 SH3D19Q5HYK7 790 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 SAMD4BQ5PRF9 694 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 RBM20Q5T481 1227 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 GPR158Q5T848 1215 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 FOXB2Q5VYV0 432 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 TAS2R42Q7RTR8 314 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 TAC4Q86UU9 113 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 CRYBG2Q8N1P7 616 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 BBS5Q8N3I7 341 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 PTGR2Q8N8N7 351 aaPredicted RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 CDC26Q8NHZ8 85 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 SCAMP5Q8TAC9 235 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 BHMTQ93088 406 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 MYLPFQ96A32 169 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 BTBD9Q96Q07 612 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 HNRNPABQ99729 332 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 MRPL57Q9BQC6 102 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 TINF2Q9BSI4 451 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 TRIM8Q9BZR9 551 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 GLOD4Q9HC38 313 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 FBRSL1Q9HCM7 1045 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 SEMA4BQ9NPR2 832 aaPredicted RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 CNGB3Q9NQW8 809 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 EIF2B3Q9NR50 452 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 MKS1Q9NXB0 559 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 GIMAP2Q9UG22 337 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 TLL2Q9Y6L7 1015 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 SBF2Q86WG5 1849 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 CDK5RAP2Q96SN8 1893 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 C17orf102A2RUQ5 167 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 CLOCKO15516 846 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 NRP2O60462 931 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 PAGE1O75459 146 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 IL1BP01584 269 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 PYGLP06737 847 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 LTA4HP09960 611 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 OR4Q2P0C623 313 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 CHRM3P20309 590 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 EEF1DP29692 281 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 ARRB2P32121 409 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 NR1H2P55055 460 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 ADARP55265 1226 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 KCNK10P57789 538 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 XIAPP98170 497 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 MS4A2Q01362 244 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 FAM187BQ17R55 369 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 ZIK1Q3SY52 487 aaPredicted RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 VPS26BQ4G0F5 336 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 OVOS1Q6IE37 1185 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 DNAJC14Q6Y2X3 702 aaPredicted RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 FRA10AC1Q70Z53 315 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 SPPL2CQ8IUH8 684 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 ADCY4Q8NFM4 1077 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 NLGN2Q8NFZ4 835 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 FAM81AQ8TBF8 368 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 GPR152Q8TDT2 470 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 DQX1Q8TE96 717 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 CCDC126Q96EE4 140 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 FAR2Q96K12 515 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 HBEGFQ99075 208 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 NPY6RQ99463 290 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 PLAC1Q9HBJ0 212 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 RNF112Q9ULX5 631 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 NDUFAF1Q9Y375 327 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 TRAF6Q9Y4K3 522 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 ASB3Q9Y575 518 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 NRCAMQ92823 1304 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 A0A0G2JLL6 359 aaPredicted RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 MEIS3P2A8K0S8 358 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 G3V2L1 256 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 H3BSA7 217 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 FZD9O00144 591 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 PDLIM1O00151 329 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 ALDH1A2O94788 518 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 IPO13O94829 963 aaKnown RBP4.78□□□□□ -1.64
USP44-201ENST00000258499 LINC00032P0C843 101 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 ODC1P11926 461 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 HGFP14210 728 aa4.78□□□□□ -1.64
USP44-201ENST00000258499 FASP25445 335 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms