RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ADGRG1Q9Y653 693 aa12.83□□□□□ -0.36
LSM5-201ENST00000223084 CNOT1A5YKK6 2376 aaKnown RBP12.83□□□□□ -0.36
LSM5-201ENST00000223084 ZNF487B1APH4 448 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 ARHGAP33O14559 1287 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 SLC31A1O15431 190 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 SPINT1O43278 529 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 WNT1P04628 370 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 PRKCGP05129 697 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 PRLRP16471 622 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 CDKN2BP42772 138 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 MMP13P45452 471 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 ID4P47928 161 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 CSNK1DP48730 415 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 RENBPP51606 427 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 AFF3P51826 1226 aaKnown RBP12.82□□□□□ -0.36
LSM5-201ENST00000223084 KIF5AQ12840 1032 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 IFI16Q16666 785 aaKnown RBP12.82□□□□□ -0.36
LSM5-201ENST00000223084 ZNF284Q2VY69 593 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 UAP1L1Q3KQV9 507 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 MARC1Q5VT66 337 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 B4GALNT4Q76KP1 1039 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 PRPF39Q86UA1 669 aaKnown RBP12.82□□□□□ -0.36
LSM5-201ENST00000223084 HORMAD1Q86X24 394 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 ZSWIM9Q86XI8 627 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 VSIG1Q86XK7 387 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 LRRC49Q8IUZ0 686 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 LRRC8AQ8IWT6 810 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 KATNAL2Q8IYT4 538 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 LRRC57Q8N9N7 239 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 CCNYQ8ND76 341 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 KIAA1524Q8TCG1 905 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 NSMCE1Q8WV22 266 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 SERAC1Q96JX3 654 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 LGMNQ99538 433 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 MYOCQ99972 504 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 NT5MQ9NPB1 228 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 FZD3Q9NPG1 666 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 TMEM9BQ9NQ34 198 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 AASDHPPTQ9NRN7 309 aa12.82□□□□□ -0.36
LSM5-201ENST00000223084 NEMP1O14524 444 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 KCNK3O14649 394 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 SLC30A4O14863 429 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 MATN3O15232 486 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 AP1G1O43747 822 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 ZRANB2O95218 330 aaKnown RBP eCLIP12.81□□□□□ -0.36
LSM5-201ENST00000223084 SYPP08247 313 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 CR2P20023 1033 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 CCNCP24863 283 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 LIMK1P53667 647 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 ATXN3P54252 364 aaPredicted RBP12.81□□□□□ -0.36
LSM5-201ENST00000223084 RACK1P63244 317 aaKnown RBP12.81□□□□□ -0.36
LSM5-201ENST00000223084 SEMG2Q02383 582 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 ADCY2Q08462 1091 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 NSUN2Q08J23 767 aaKnown RBP eCLIP12.81□□□□□ -0.36
LSM5-201ENST00000223084 FGL2Q14314 439 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 TEAD4Q15561 434 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 TAZQ16635 292 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 KIF19Q2TAC6 998 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 TIGD7Q6NT04 549 aaPredicted RBP12.81□□□□□ -0.36
LSM5-201ENST00000223084 ADAT2Q7Z6V5 191 aaKnown RBP12.81□□□□□ -0.36
LSM5-201ENST00000223084 CCDC50Q8IVM0 306 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 RCOR2Q8IZ40 523 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 MINDY1Q8N5J2 469 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.81□□□□□ -0.36
LSM5-201ENST00000223084 TEX26Q8N6G2 289 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 FEM1CQ96JP0 617 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 TSGA13Q96PP4 275 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 TUBGCP5Q96RT8 1024 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 MGME1Q9BQP7 344 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 ATP13A3Q9H7F0 1226 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 IL21RQ9HBE5 538 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 NOD2Q9HC29 1040 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 SCUBE2Q9NQ36 999 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 DLL3Q9NYJ7 618 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 SAE1Q9UBE0 346 aaPredicted RBP12.81□□□□□ -0.36
LSM5-201ENST00000223084 DKK3Q9UBP4 350 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 SNX11Q9Y5W9 270 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 SPTBN2O15020 2390 aa12.81□□□□□ -0.36
LSM5-201ENST00000223084 TMEM131Q92545 1883 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 hCG_1818297A0A087WSY0 165 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 A0A1W2PR77 199 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 TSPAN11A1L157 253 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 DCDC2BA2VCK2 349 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 IGLON5A6NGN9 336 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 AREL1O15033 823 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 ARHGAP6O43182 974 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 CST8O60676 142 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 FTCDO95954 541 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 ZFXP17010 805 aaPredicted RBP12.8□□□□□ -0.36
LSM5-201ENST00000223084 MX2P20592 715 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 XPAP23025 273 aaPredicted RBP12.8□□□□□ -0.36
LSM5-201ENST00000223084 CTNNA1P35221 906 aaKnown RBP12.8□□□□□ -0.36
LSM5-201ENST00000223084 GRIA4P48058 902 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 AP1S1P61966 158 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 CCZ1BP86790 482 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 CCZ1P86791 482 aaPredicted RBP12.8□□□□□ -0.36
LSM5-201ENST00000223084 BCL2L1Q07817 233 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 ITKQ08881 620 aa12.8□□□□□ -0.36
LSM5-201ENST00000223084 HNRNPDQ14103 355 aaKnown RBP12.8□□□□□ -0.36
LSM5-201ENST00000223084 GRM3Q14832 879 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms