RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 EID2Q8N6I1 236 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 FNIP1Q8TF40 1166 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 CNDP2Q96KP4 475 aaKnown RBP16.21■□□□□ 0.19
LMX1B-204ENST00000561065 EPAS1Q99814 870 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 ANP32EQ9BTT0 268 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 CATSPERBQ9H7T0 1116 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 GPR27Q9NS67 375 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 MYLKQ15746 1914 aa16.21■□□□□ 0.19
LMX1B-204ENST00000561065 ANKRD11Q6UB99 2663 aaPredicted RBP16.21■□□□□ 0.19
LMX1B-204ENST00000561065 DSPP15924 2871 aaKnown RBP16.21■□□□□ 0.19
LMX1B-204ENST00000561065 APC2O95996 2303 aa16.21■□□□□ 0.18
LMX1B-204ENST00000561065 FAM149AA5PLN7 773 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 SRRM3A6NNA2 597 aaPredicted RBP16.2■□□□□ 0.18
LMX1B-204ENST00000561065 RASA4BC9J798 803 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 ENC1O14682 589 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 RASA4O43374 803 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 UGT2B4P06133 528 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 SKILP12757 684 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 PSMA2P25787 234 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 ACADVLP49748 655 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 DHRS13Q6UX07 377 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 ABI3BPQ7Z7G0 1075 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 RYBPQ8N488 228 aaPredicted RBP16.2■□□□□ 0.18
LMX1B-204ENST00000561065 OR8K1Q8NGG5 319 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 SNRNP25Q9BV90 132 aaKnown RBP16.2■□□□□ 0.18
LMX1B-204ENST00000561065 ISCUQ9H1K1 167 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 DEF6Q9H4E7 631 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 PDFQ9HBH1 243 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 LHX3Q9UBR4 397 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 CNOT8Q9UFF9 292 aaKnown RBP16.2■□□□□ 0.18
LMX1B-204ENST00000561065 LCMT1Q9UIC8 334 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 AP4E1Q9UPM8 1137 aa16.2■□□□□ 0.18
LMX1B-204ENST00000561065 TMEM191CA6NGB0 347 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 C16orf96A6NNT2 1141 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 KRIT1O00522 736 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 BUB1O43683 1085 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 AP1G1O43747 822 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 PRPSAP2O60256 369 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 AKT2P31751 481 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 TPI1P60174 286 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 SERINC3Q13530 473 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 ZNF805Q5CZA5 627 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 TPRG1LQ5T0D9 272 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 KIAA1161Q6NSJ0 714 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 FBXL19Q6PCT2 694 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 PSTKQ8IV42 348 aaKnown RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 UMODL1-AS1Q8N2C9 162 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 TSC1Q92574 1164 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 ZNF653Q96CK0 615 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 KLHDC7BQ96G42 594 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 EXOC2Q96KP1 924 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 BMFQ96LC9 184 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 KCTD15Q96SI1 283 aaPredicted RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 KLF6Q99612 283 aaPredicted RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 CALN1Q9BXU9 219 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 LRRC19Q9H756 370 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 RALYQ9UKM9 306 aaKnown RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 LRP4O75096 1905 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 POM121BA6NF01 834 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 ZSCAN5CA6NGD5 496 aaPredicted RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 INSIG1O15503 277 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 FGF10O15520 208 aaPredicted RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 MAGEC1O60732 1142 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 LDOC1O95751 146 aaPredicted RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 CASP14P31944 242 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 YBEYP58557 167 aaPredicted RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 SNRPD1P62314 119 aaKnown RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 RPS21P63220 83 aaKnown RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 SMAD1Q15797 465 aaKnown RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 MYLK3Q32MK0 819 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 PARP15Q460N3 678 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 HGSNATQ68CP4 663 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 ALKBH5Q6P6C2 394 aaKnown RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 KYAT3Q6YP21 454 aaKnown RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 PROSER1Q86XN7 944 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 ZNF354CQ86Y25 554 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 SLC25A45Q8N413 288 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 NPWQ8N729 165 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 RNF214Q8ND24 703 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 CELF6Q96J87 481 aaKnown RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 LRIG1Q96JA1 1093 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 GDAP1L1Q96MZ0 367 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 KLHL32Q96NJ5 620 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 SLC17A9Q9BYT1 436 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 DHX35Q9H5Z1 703 aaKnown RBP16.19■□□□□ 0.18
LMX1B-204ENST00000561065 UCKL1Q9NWZ5 548 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 PCSK1NQ9UHG2 260 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 ZFYVE26Q68DK2 2539 aa16.19■□□□□ 0.18
LMX1B-204ENST00000561065 COL27A1Q8IZC6 1860 aaPredicted RBP16.18■□□□□ 0.18
LMX1B-204ENST00000561065 ITPR1Q14643 2758 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 TRIM38O00635 465 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 AREL1O15033 823 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 DAPK3O43293 454 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 LRCH4O75427 683 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 PAK4O96013 591 aaPredicted RBP16.18■□□□□ 0.18
LMX1B-204ENST00000561065 GIMD1P0DJR0 217 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 TCF4P15884 667 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 ITIH2P19823 946 aa16.18■□□□□ 0.18
LMX1B-204ENST00000561065 MIPP30301 263 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms