RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 GOLGA8NF8WBI6 632 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 TGM5O43548 720 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 FAM189A1O60320 539 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PLA2G6O60733 806 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 ATP6V1G1O75348 118 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PDE5AO76074 875 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PRKD3O94806 890 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PROSCO94903 275 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 CFBP00751 764 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 ENO1P06733 434 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 DLDP09622 509 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 RALAP11233 206 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 EEF2P13639 858 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 AOC1P19801 751 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 RRM1P23921 792 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 KLRC2P26717 231 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PRDX6P30041 224 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PTPN7P35236 360 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 SERPINB6P35237 376 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 HOXD13P35453 343 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PIK3CAP42336 1068 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 GLRBP48167 497 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 VPS41P49754 854 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 MXI1P50539 228 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 ARSEP51690 589 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 CASP5P51878 434 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 HDAC4P56524 1084 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 NOP14P78316 857 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 PHEXP78562 749 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 SLC6A3Q01959 620 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 ZNF543Q08ER8 600 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 GPS1Q13098 491 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PPP2R5CQ13362 524 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 VGLL4Q14135 290 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 TRIP13Q15645 432 aaPredicted RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 MAPK6Q16659 721 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 SLC35G1Q2M3R5 365 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 KBTBD12Q3ZCT8 623 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 EPC2Q52LR7 807 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 ZFYVE27Q5T4F4 411 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 SYDE2Q5VT97 1194 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 SLFN12LQ6IEE8 588 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 RINT1Q6NUQ1 792 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 RWDD4Q6NW29 188 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 AADACL2Q6P093 401 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 ARCQ7LC44 396 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 ZNF720Q7Z2F6 126 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PRPF39Q86UA1 669 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 ADGRF4Q8IZF3 695 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 CCDC33Q8N5R6 958 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 XXYLT1Q8NBI6 393 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 RFWD2Q8NHY2 731 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PPP1R14CQ8TAE6 165 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 TCP10LQ8TDR4 215 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PPP4R1Q8TF05 950 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 GDPD5Q8WTR4 605 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 SLC20A1Q8WUM9 679 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 ABTB1Q969K4 478 aaPredicted RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 ZBTB8AQ96BR9 441 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 NMD3Q96D46 503 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 LRGUKQ96M69 825 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 PRICKLE1Q96MT3 831 aaPredicted RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 FOXB1Q99853 325 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 FGFBP2Q9BYJ0 223 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 GLIS2Q9BZE0 524 aaPredicted RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 ZCWPW1Q9H0M4 648 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 DHX33Q9H6R0 707 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 TBC1D23Q9NUY8 699 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 MRGBPQ9NV56 204 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 DNAJC17Q9NVM6 304 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 RHBDL2Q9NX52 303 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 TAS2R14Q9NYV8 317 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 NOCTQ9UK39 431 aaKnown RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 TRHDEQ9UKU6 1024 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 ITGA11Q9UKX5 1188 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 TMED5Q9Y3A6 229 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 DTNAQ9Y4J8 743 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 SPEF1Q9Y4P9 236 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 RNF114Q9Y508 228 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
USP28-202ENST00000535607 PTPRFP10586 1907 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 CLUHO75153 1309 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 MYPNQ86TC9 1320 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 A0A0G2JMZ2 1700 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 RBBP6Q7Z6E9 1792 aaKnown RBP6.72□□□□□ -1.33
USP28-202ENST00000535607 POLR2AP24928 1970 aaKnown RBP6.72□□□□□ -1.33
USP28-202ENST00000535607 MYH11P35749 1972 aa6.72□□□□□ -1.33
USP28-202ENST00000535607 C15orf38-AP3S2A0A0A6YYH1 394 aa6.72□□□□□ -1.33
USP28-202ENST00000535607 A0A0J9YVX5 310 aa6.72□□□□□ -1.33
USP28-202ENST00000535607 DYTNA2CJ06 578 aa6.72□□□□□ -1.33
USP28-202ENST00000535607 ARHGEF35A5YM69 484 aa6.72□□□□□ -1.33
USP28-202ENST00000535607 CAPN14A8MX76 684 aa6.72□□□□□ -1.33
USP28-202ENST00000535607 H0YJX3 145 aa6.72□□□□□ -1.33
USP28-202ENST00000535607 MATN2O00339 956 aa6.72□□□□□ -1.33
USP28-202ENST00000535607 CASQ2O14958 399 aaPredicted RBP6.72□□□□□ -1.33
USP28-202ENST00000535607 LIASO43766 372 aa6.72□□□□□ -1.33
USP28-202ENST00000535607 CCNT2O60583 730 aaKnown RBP6.72□□□□□ -1.33
USP28-202ENST00000535607 TRMUO75648 421 aaKnown RBP6.72□□□□□ -1.33
USP28-202ENST00000535607 FAM155BO75949 473 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms