RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 NOD2Q9HC29 1040 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 MRM3Q9HC36 420 aaKnown RBP16.19■□□□□ 0.18
NUP54-214ENST00000514307 SYBUQ9NX95 663 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 MOCS1Q9NZB8 636 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 LGALS13Q9UHV8 139 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 SOX13Q9UN79 622 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 NOVA2Q9UNW9 492 aaKnown RBP16.19■□□□□ 0.18
NUP54-214ENST00000514307 RPS6KL1Q9Y6S9 549 aa16.19■□□□□ 0.18
NUP54-214ENST00000514307 HEATR9A2RTY3 570 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 H3BQF6 201 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 POLR3GO15318 223 aaPredicted RBP16.18■□□□□ 0.18
NUP54-214ENST00000514307 SLC34A2O95436 690 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 NDST3O95803 873 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 ASLP04424 464 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 FGF1P05230 155 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 ATP5BP06576 529 aaKnown RBP16.18■□□□□ 0.18
NUP54-214ENST00000514307 INHBAP08476 426 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 PAMP19021 973 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 CR2P20023 1033 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 IGFBP4P22692 258 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 PRKCHP24723 683 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 SLCO1A2P46721 670 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 SNRPD1P62314 119 aaKnown RBP16.18■□□□□ 0.18
NUP54-214ENST00000514307 E2F5Q15329 346 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 SLC1A5Q15758 541 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 SKIDA1Q1XH10 827 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 ANKRD20A4Q4UJ75 823 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 NUDT18Q6ZVK8 323 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 KIAA0907Q7Z7F0 614 aaPredicted RBP16.18■□□□□ 0.18
NUP54-214ENST00000514307 PLPP6Q8IY26 295 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 MPP5Q8N3R9 675 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 CPA6Q8N4T0 437 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 SLC25A41Q8N5S1 370 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
NUP54-214ENST00000514307 FAM76AQ8TAV0 307 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 WFDC5Q8TCV5 224 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 ELSPBP1Q96BH3 223 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 ZBTB9Q96C00 473 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 LRRC3BQ96PB8 259 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 SRPK1Q96SB4 655 aaKnown RBP16.18■□□□□ 0.18
NUP54-214ENST00000514307 CEP44Q9C0F1 390 aa16.18■□□□□ 0.18
NUP54-214ENST00000514307 PSMC3IPQ9P2W1 217 aaPredicted RBP16.18■□□□□ 0.18
NUP54-214ENST00000514307 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.17■□□□□ 0.18
NUP54-214ENST00000514307 IQANK1A0A1B0GTG1 560 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 MUSKO15146 869 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 CD160O95971 181 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 LAMP2P13473 410 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 HLA-FP30511 346 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 DGKGP49619 791 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 SERPINB9P50453 376 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 VASPP50552 380 aaPredicted RBP16.17■□□□□ 0.18
NUP54-214ENST00000514307 MGAT5Q09328 741 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 GRM3Q14832 879 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 GRIN2CQ14957 1233 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 KCTD16Q68DU8 428 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 TANGO2Q6ICL3 276 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 NCEH1Q6PIU2 408 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 ADGRD1Q6QNK2 874 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 MTSS1LQ765P7 747 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 SLC26A11Q86WA9 606 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 CTAGE3PQ8IX95 158 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 AGGF1Q8N302 714 aaeCLIP16.17■□□□□ 0.18
NUP54-214ENST00000514307 RIN3Q8TB24 985 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 EPS8L3Q8TE67 593 aaKnown RBP16.17■□□□□ 0.18
NUP54-214ENST00000514307 ZNF419Q96HQ0 510 aaPredicted RBP16.17■□□□□ 0.18
NUP54-214ENST00000514307 GAS2L1Q99501 681 aaPredicted RBP16.17■□□□□ 0.18
NUP54-214ENST00000514307 FAM83CQ9BQN1 747 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 PPANQ9NQ55 473 aaKnown RBP16.17■□□□□ 0.18
NUP54-214ENST00000514307 SENP1Q9P0U3 644 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 DEC1Q9P2X7 70 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 CLEC4EQ9ULY5 219 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 HS3ST2Q9Y278 367 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 SLC27A6Q9Y2P4 619 aa16.17■□□□□ 0.18
NUP54-214ENST00000514307 ANAPC1Q9H1A4 1944 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 A0A1W2PQ67 120 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 FAM159BA6NKW6 160 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 ECI2O75521 394 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 KRT37O76014 449 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 PAPSS2O95340 614 aaPredicted RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 POP4O95707 220 aaKnown RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 IGSF6O95976 241 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 SRPRAP08240 638 aaKnown RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 PSMC3P17980 439 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 CNTFP26441 200 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 RPL26P61254 145 aaKnown RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 CRADDP78560 199 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 ILF2Q12905 390 aaKnown RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 CRYMQ14894 314 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 KBTBD12Q3ZCT8 623 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 ACCSLQ4AC99 568 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 TTMPQ5BVD1 217 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 SIRPB2Q5JXA9 342 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 EMC10Q5UCC4 262 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 MBLAC2Q68D91 279 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 NDUFAF2Q8N183 169 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 SH2D3CQ8N5H7 860 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 PCDH20Q8N6Y1 951 aaKnown RBP16.16■□□□□ 0.18
NUP54-214ENST00000514307 NAT16Q8N8M0 369 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 BRSK1Q8TDC3 778 aa16.16■□□□□ 0.18
NUP54-214ENST00000514307 RMDN1Q96DB5 314 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms