RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 GBE1Q04446 702 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 HNRNPDQ14103 355 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 KIF19Q2TAC6 998 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 BOLA3Q53S33 107 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 ANKRD20A8PQ5CZ79 823 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 ARSIQ5FYB1 569 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 C22orf39Q6P5X5 142 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 LAYNQ6UX15 382 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 PSTKQ8IV42 348 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 UMODL1-AS1Q8N2C9 162 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 CHST14Q8NCH0 376 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 TMIEQ8NEW7 156 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 OR2A12Q8NGT7 310 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 C1orf216Q8TAB5 229 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 RNF25Q96BH1 459 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 PPP1R16AQ96I34 528 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 SLC6A18Q96N87 628 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 CAMK1GQ96NX5 476 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 TM6SF2Q9BZW4 377 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 MAGEH1Q9H213 219 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 RETREG1Q9H6L5 497 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 CATSPERBQ9H7T0 1116 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 IL21RQ9HBE5 538 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 TM7SF3Q9NS93 570 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 SAE1Q9UBE0 346 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 HECAQ9UBI9 543 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 SARDHQ9UL12 918 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 TPX2Q9ULW0 747 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 GUCA1BQ9UMX6 200 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 FCF1Q9Y324 198 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 SNX11Q9Y5W9 270 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 SLCO1B1Q9Y6L6 691 aa8.89□□□□□ -0.99
PDLIM5-213ENST00000509357 UPK3BL1B0FP48 263 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 UPK3BL2E5RIL1 263 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PLRG1O43660 514 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 RNGTTO60942 597 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 LEFTY1O75610 366 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PCDH8O95206 1070 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 KRT1P04264 644 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 CTSLP07711 333 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PYGMP11217 842 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PECAM1P16284 738 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 CTNNA2P26232 953 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 CD38P28907 300 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 DRD3P35462 400 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 RGRP47804 291 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 HCAR3P49019 387 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 CCT8P50990 548 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PAPOLAP51003 745 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PPP2CBP62714 309 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PPP2CAP67775 309 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 CCDC173Q0VFZ6 552 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 ZNF211Q13398 564 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 SERINC3Q13530 473 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 STAT4Q14765 748 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PAFAH1B3Q15102 231 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 TRIP6Q15654 476 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 CARD16Q5EG05 197 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 LRRC38Q5VT99 294 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 SLC9A4Q6AI14 798 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 FBXL19Q6PCT2 694 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 DPY19L3Q6ZPD9 716 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 ERN2Q76MJ5 926 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PIP4P1Q86T03 277 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 DAAM2Q86T65 1068 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 NAXDQ8IW45 347 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PGBD5Q8N414 524 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PCDH20Q8N6Y1 951 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 RHBDD1Q8TEB9 315 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 HES6Q96HZ4 224 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 RNF157Q96PX1 679 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 HEPHQ9BQS7 1158 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 ZNF670Q9BS34 389 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 CEP44Q9C0F1 390 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 KDM4CQ9H3R0 1056 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 ZDHHC6Q9H6R6 413 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 TRMT1Q9NXH9 659 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 DONSONQ9NYP3 566 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 FNDC3AQ9Y2H6 1198 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PCDHA3Q9Y5H8 950 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 MYLKQ15746 1914 aa8.88□□□□□ -0.99
PDLIM5-213ENST00000509357 PLXNA2O75051 1894 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 hCG_1818297A0A087WSY0 165 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 A0A1W2PQU0 124 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 TTC24A2A3L6 582 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 LRRD1A4D1F6 860 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 ZSCAN5CA6NGD5 496 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 GOLGA8CPA6NN73 597 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 KRIT1O00522 736 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 NEMP1O14524 444 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 VILLO15195 856 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 SLC31A1O15431 190 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 FGF10O15520 208 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 PSTPIP1O43586 416 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 KDELR3O43731 214 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 SPOPO43791 374 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 CCDC175P0C221 793 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 PMLP29590 882 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 GKP32189 559 aa8.87□□□□□ -0.99
PDLIM5-213ENST00000509357 NUDT1P36639 197 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms