RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 INO80DQ53TQ3 878 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 EOGTQ5NDL2 527 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 ATXN7L2Q5T6C5 722 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 RETSATQ6NUM9 610 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 C22orf39Q6P5X5 142 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 DPY19L3Q6ZPD9 716 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 NYAP1Q6ZVC0 841 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 NUDT18Q6ZVK8 323 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 SLC13A5Q86YT5 568 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 CCDC50Q8IVM0 306 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 ZNF843Q8N446 348 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 CHCHD4Q8N4Q1 142 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 TEX26Q8N6G2 289 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 UBL4BQ8N7F7 174 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 CNTD1Q8N815 330 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 FRMD1Q8N878 549 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 ATP11CQ8NB49 1132 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 TSEN2Q8NCE0 465 aaKnown RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 MDGA1Q8NFP4 955 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 UBE2Q2Q8WVN8 375 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 ISG20Q96AZ6 181 aaKnown RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 HAUS1Q96CS2 278 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 LOXL4Q96JB6 756 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 ALS2CR12Q96Q35 445 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 UBL7Q96S82 380 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 IER2Q9BTL4 223 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 RSPH9Q9H1X1 276 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 CARD9Q9H257 536 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 CLMPQ9H6B4 373 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 PRDM16Q9HAZ2 1276 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 DONSONQ9NYP3 566 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 SMARCAL1Q9NZC9 954 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 UBA2Q9UBT2 640 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 SERGEFQ9UGK8 458 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 SLC25A13Q9UJS0 675 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 PPM1HQ9ULR3 514 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 ZKSCAN5Q9Y2L8 839 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 JRKLQ9Y4A0 524 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 WASF2Q9Y6W5 498 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 ARID1BQ8NFD5 2236 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 SPAARA0A1B0GVQ0 90 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 TCRBV21S2A2A0A5A6 115 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 TARSL2A2RTX5 802 aaKnown RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 ZSCAN5CA6NGD5 496 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 C10orf142B7Z368 130 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 APOC4-APOC2K7ER74 178 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 TK2O00142 265 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 KCNK1O00180 336 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 PDE2AO00408 941 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 PLK4O00444 970 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 MCF2LO15068 1137 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 ZNF185O15231 689 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 MATN3O15232 486 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 KIF5CO60282 957 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 APBB3O95704 486 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 APOC2P02655 101 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 ZFXP17010 805 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 TGM2P21980 687 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 CCNCP24863 283 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 CD68P34810 354 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 NR2C2P49116 596 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 CCNHP51946 323 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 GNG11P61952 73 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 RPS14P62263 151 aaKnown RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 OTUD4Q01804 1114 aaKnown RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 NIPAL4Q0D2K0 466 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 WASHC5Q12768 1159 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 KCTD19Q17RG1 926 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 MAP7D1Q3KQU3 841 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 UAP1L1Q3KQV9 507 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 ACCSLQ4AC99 568 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 TMCO4Q5TGY1 634 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 PAPD7Q5XG87 772 aaKnown RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 ANO7Q6IWH7 933 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 TRMT11Q7Z4G4 463 aaKnown RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 ZC3H18Q86VM9 953 aaKnown RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 CACUL1Q86Y37 369 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 TMPRSS6Q8IU80 811 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 LRRC49Q8IUZ0 686 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 PLPP6Q8IY26 295 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 TMEFF1Q8IYR6 380 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 RASGEF1CQ8N431 466 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 ATPAF2Q8N5M1 289 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 AADATQ8N5Z0 425 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 PCDH20Q8N6Y1 951 aaKnown RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 OR6K2Q8NGY2 324 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 OR2T3Q8NH03 318 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 CCDC26Q8TAB7 109 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 SLC35B2Q8TB61 432 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 MDM1Q8TC05 714 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 HMGB4Q8WW32 186 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 ATG4AQ8WYN0 398 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 FATE1Q969F0 183 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 HDAC11Q96DB2 347 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 MS4A14Q96JA4 679 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 EXOC2Q96KP1 924 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 ZNF599Q96NL3 588 aa7.09□□□□□ -1.27
LIMD1-204ENST00000474665 QKIQ96PU8 341 aaKnown RBP eCLIP7.09□□□□□ -1.27
LIMD1-204ENST00000474665 PSKH2Q96QS6 385 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms