RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 ENPP3O14638 875 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 ABCG1P45844 678 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 MARCKSL1P49006 195 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 GPR15P49685 360 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 SLC20A2Q08357 652 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 CYP4X1Q8N118 509 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 OR7D4Q8NG98 312 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 CERS2Q96G23 380 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 THTPAQ9BU02 230 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 ARMC7Q9H6L4 198 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 APOBEC3GQ9HC16 384 aaKnown RBP12.38□□□□□ -0.43
IRF1-208ENST00000472045 IMP3Q9NV31 184 aaKnown RBP12.38□□□□□ -0.43
IRF1-208ENST00000472045 NR5A2O00482 541 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 ERFP50548 548 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 COPAP53621 1224 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 ACSM2AQ08AH3 577 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 ACSM2BQ68CK6 577 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 VITQ6UXI7 678 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.38□□□□□ -0.43
IRF1-208ENST00000472045 CELF5Q8N6W0 485 aaKnown RBP12.38□□□□□ -0.43
IRF1-208ENST00000472045 ZNF784Q8NCA9 323 aaPredicted RBP12.38□□□□□ -0.43
IRF1-208ENST00000472045 CLIC5Q9NZA1 410 aa12.38□□□□□ -0.43
IRF1-208ENST00000472045 SPEF2Q9C093 1822 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 IFNA14P01570 189 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 SOD2P04179 222 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 ASLP04424 464 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 BGNP21810 368 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 GUCA1AP43080 201 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 ASPAP45381 313 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 PDGFRLQ15198 375 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 SNAP47Q5SQN1 464 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 RAVER1Q8IY67 606 aaKnown RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 DAW1Q8N136 415 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 CAMKK1Q8N5S9 505 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 OR4L1Q8NH43 312 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 PRCCQ92733 491 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 VMP1Q96GC9 406 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 MCCC1Q96RQ3 725 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 DZANK1Q9NVP4 752 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 NOP53Q9NZM5 478 aaKnown RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 LTA4HP09960 611 aaKnown RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 GCKP35557 465 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 PLK1P53350 603 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 C2orf27AQ580R0 203 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 CNSTQ6PJW8 725 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 CIR1Q86X95 450 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 BBS7Q8IWZ6 715 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 CATSPER1Q8NEC5 780 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 HNRNPLLQ8WVV9 542 aaKnown RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 TFAP2BQ92481 460 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 L2HGDHQ9H9P8 463 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 ABCB8Q9NUT2 735 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 IFNA16P05015 189 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 PCCBP05166 539 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 ABCB1P08183 1280 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 IQCF3P0C7M6 154 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 CYBAP13498 195 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 KCNE1P15382 129 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 L1CAMP32004 1257 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 GATMP50440 423 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 DGKEP52429 567 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 ALDH6A1Q02252 535 aaKnown RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 CDCA2Q69YH5 1023 aaPredicted RBP12.37□□□□□ -0.43
IRF1-208ENST00000472045 POTEHQ6S545 545 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 UNC5AQ6ZN44 842 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 C11orf74Q86VG3 221 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 FNDC5Q8NAU1 212 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 FNIP1Q8TF40 1166 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 MAGEB18Q96M61 343 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 POMKQ9H5K3 350 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 ALG9Q9H6U8 611 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 SQORQ9Y6N5 450 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 KRT87PA6NCN2 255 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 URADA6NGE7 173 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 UBDO15205 165 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 SERPINE1P05121 402 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 THRAP10827 490 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 GNSP15586 552 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 MAP3K10Q02779 954 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 FAAP100Q0VG06 881 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 SH3GL1Q99961 368 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 C16orf70Q9BSU1 422 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 RHOBTB2Q9BYZ6 727 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 DMAC2Q9NW81 257 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 KLHL28Q9NXS3 571 aa12.37□□□□□ -0.43
IRF1-208ENST00000472045 GCATO75600 419 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 LSP1P33241 339 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 SPIDRQ14159 915 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 CBX2Q14781 532 aaPredicted RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 MON1BQ7L1V2 547 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 SLC41A1Q8IVJ1 513 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 MIER2Q8N344 545 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 HDAC10Q969S8 669 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 APOPT1Q96IL0 206 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms