RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 ADORA2A-AS1P86434 159 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 PMP22Q01453 160 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 CDK18Q07002 472 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 GAGE1Q13065 139 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 GAGE4Q13068 117 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 PUM3Q15397 648 aaKnown RBP2.33□□□□□ -2.04
CCDC93-205ENST00000466171 PDCD2Q16342 344 aaPredicted RBP2.33□□□□□ -2.04
CCDC93-205ENST00000466171 TUBB8Q3ZCM7 444 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 GXYLT1Q4G148 440 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 CCDC38Q502W7 563 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 ATPAF1Q5TC12 328 aaPredicted RBP2.33□□□□□ -2.04
CCDC93-205ENST00000466171 PGBD2Q6P3X8 592 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 MTFR2Q6P444 385 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 FOXL2NBQ6ZUU3 175 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 GALNT15Q8N3T1 639 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 PGBD5Q8N414 524 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 MYCT1Q8N699 235 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 ATG16L2Q8NAA4 619 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 NEXN-AS1Q8NBZ9 246 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 RFWD2Q8NHY2 731 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 TBC1D22AQ8WUA7 517 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 CCT6BQ92526 530 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 KCNJ9Q92806 393 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 USP13Q92995 863 aaPredicted RBP2.33□□□□□ -2.04
CCDC93-205ENST00000466171 C18orf8Q96DM3 657 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 TMEM41AQ96HV5 264 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 MECRQ9BV79 373 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 TP63Q9H3D4 680 aaPredicted RBP2.33□□□□□ -2.04
CCDC93-205ENST00000466171 LRFN1Q9P244 771 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 SLC39A10Q9ULF5 831 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 DHDHQ9UQ10 334 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 OSGIN2Q9Y236 505 aa2.33□□□□□ -2.04
CCDC93-205ENST00000466171 MORC2Q9Y6X9 1032 aaPredicted RBP2.33□□□□□ -2.04
CCDC93-205ENST00000466171 DDTLA6NHG4 134 aaPredicted RBP2.32□□□□□ -2.04
CCDC93-205ENST00000466171 DNPH1O43598 174 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 STRNO43815 780 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 PIP5K1CO60331 668 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 TIPRLO75663 272 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 DDAH2O95865 285 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 AFPP02771 609 aaKnown RBP2.32□□□□□ -2.04
CCDC93-205ENST00000466171 TFRCP02786 760 aaKnown RBP2.32□□□□□ -2.04
CCDC93-205ENST00000466171 IGHV4-30-4P0DP06 118 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 CETPP11597 493 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 KRT5P13647 590 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 NLRP5P59047 1200 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 CYP4A11Q02928 519 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 ICA1Q05084 483 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 FCN2Q15485 313 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 PFKFB4Q16877 469 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 SYT16Q17RD7 645 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 DGLUCYQ7Z3D6 616 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 MYPOPQ86VE0 399 aaPredicted RBP2.32□□□□□ -2.04
CCDC93-205ENST00000466171 KCNH5Q8NCM2 988 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 IPO4Q8TEX9 1081 aaKnown RBP2.32□□□□□ -2.04
CCDC93-205ENST00000466171 RSC1A1Q92681 617 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 TRIM63Q969Q1 353 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 SCLT1Q96NL6 688 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 PIGSQ96S52 555 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 HERPUD2Q9BSE4 406 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 NPFFR1Q9GZQ6 430 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 ZNF334Q9HCZ1 680 aaPredicted RBP2.32□□□□□ -2.04
CCDC93-205ENST00000466171 OBP2BQ9NPH6 170 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 TMEM51Q9NW97 253 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 SMARCAL1Q9NZC9 954 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 BAG5Q9UL15 447 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 ADAM18Q9Y3Q7 739 aa2.32□□□□□ -2.04
CCDC93-205ENST00000466171 IGKV3D-15A0A087WSY6 115 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 A0A1B0GVY2 172 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 hCG_1642624A0A1W2PR95 340 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 AQP12BA6NM10 295 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 LGALS16A8MUM7 142 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 GRM8O00222 908 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 SYN3O14994 580 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 HNRNPRO43390 633 aaKnown RBP2.31□□□□□ -2.04
CCDC93-205ENST00000466171 CREB3O43889 395 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 SKAP2O75563 359 aaPredicted RBP2.31□□□□□ -2.04
CCDC93-205ENST00000466171 SLC22A3O75751 556 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 VNN2O95498 520 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 PMS2P2O95744 297 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 CSTBP04080 98 aaKnown RBP2.31□□□□□ -2.04
CCDC93-205ENST00000466171 CFC1BP0CG36 223 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 CFC1P0CG37 223 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 CYP4B1P13584 511 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 MYF6P23409 242 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 CDK7P50613 346 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 HSD17B4P51659 736 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 RPS6KA3P51812 740 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 ZNF132P52740 706 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 BLMHQ13867 455 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 DHX34Q14147 1143 aaKnown RBP2.31□□□□□ -2.04
CCDC93-205ENST00000466171 BTBD16Q32M84 506 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 SLC26A9Q7LBE3 791 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 RNF144BQ7Z419 303 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 GALNT7Q86SF2 657 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 SFR1Q86XK3 245 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 ZNF354CQ86Y25 554 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 SCN4BQ8IWT1 228 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 KLHDC8BQ8IXV7 354 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 MYRIPQ8NFW9 859 aa2.31□□□□□ -2.04
CCDC93-205ENST00000466171 GRAPLQ8TC17 118 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms