RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 LGMNQ99538 433 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 ULBP1Q9BZM6 244 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 EBF2Q9HAK2 575 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 TDP1Q9NUW8 608 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 FBXL21Q9UKT6 434 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 TRHDEQ9UKU6 1024 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 MFHAS1Q9Y4C4 1052 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 MYO16Q9Y6X6 1858 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 WDR91A4D1P6 747 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 ZNF840PA6NDX5 716 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 AP3B1O00203 1094 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 CAPN9O14815 690 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 GLRA3O75311 464 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 AP2A1O95782 977 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 BPGMP07738 259 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 ERCC2P18074 760 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 BGNP21810 368 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 SERPINB6P35237 376 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 GRIA1P42261 906 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 SLC5A3P53794 718 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 OCRLQ01968 901 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 AP1B1Q10567 949 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 IFRD2Q12894 506 aaPredicted RBP10.06□□□□□ -0.8
PTPRD-207ENST00000463477 TAF10Q12962 218 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 CRYMQ14894 314 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 SLC44A4Q53GD3 710 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 TEX44Q53QW1 395 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 TAF1BQ53T94 588 aaPredicted RBP10.06□□□□□ -0.8
PTPRD-207ENST00000463477 WASHC2DQ5SRD0 308 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 PACS1Q6VY07 963 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 BHLHA9Q7RTU4 235 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 FBXL6Q8N531 539 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 PDCD7Q8N8D1 485 aaKnown RBP10.06□□□□□ -0.8
PTPRD-207ENST00000463477 PDZD8Q8NEN9 1154 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 RFWD2Q8NHY2 731 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 SCAMP5Q8TAC9 235 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 IRF7Q92985 503 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 UTP4Q969X6 686 aaKnown RBP10.06□□□□□ -0.8
PTPRD-207ENST00000463477 RSPRY1Q96DX4 576 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 ANKRD27Q96NW4 1050 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 LRRC3BQ96PB8 259 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 CYP2S1Q96SQ9 504 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 FBXO44Q9H4M3 255 aa10.06□□□□□ -0.8
PTPRD-207ENST00000463477 F5P12259 2224 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 DOCK4Q8N1I0 1966 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 GREB1Q4ZG55 1949 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 MAGEB16A2A368 324 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 KRBA1A5PL33 1030 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 YJEFN3A6XGL0 299 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 E7ENQ6 273 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 CREB3O43889 395 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 UGT1A9O60656 530 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 HAUS5O94927 633 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 PRAMEF12O95522 483 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 POLBP06746 335 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 USP17L7P0C7H9 530 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 ZDHHC11BP0C7U3 371 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 NEFHP12036 1026 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 HDCP19113 662 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 TARSP26639 723 aaKnown RBP10.05□□□□□ -0.8
PTPRD-207ENST00000463477 PSMB4P28070 264 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 GDI1P31150 447 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 MAGEA12P43365 314 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 CLCN5P51795 746 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 CCNG1P51959 295 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 MLLT6P55198 1093 aaPredicted RBP10.05□□□□□ -0.8
PTPRD-207ENST00000463477 STARD6P59095 220 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 TPI1P60174 286 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 PRKCQQ04759 706 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 GALNT2Q10471 571 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 KCTD11Q693B1 232 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 ITPRIPL1Q6GPH6 555 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 MTDHQ86UE4 582 aaKnown RBP10.05□□□□□ -0.8
PTPRD-207ENST00000463477 NUDCD3Q8IVD9 361 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 NDUFAF2Q8N183 169 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 SIX5Q8N196 739 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 KIF2BQ8N4N8 673 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 BPIFB1Q8TDL5 484 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 NDRG1Q92597 394 aaKnown RBP10.05□□□□□ -0.8
PTPRD-207ENST00000463477 DNASE1L2Q92874 299 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 USP13Q92995 863 aaPredicted RBP10.05□□□□□ -0.8
PTPRD-207ENST00000463477 ATP2A3Q93084 1043 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 FBXO32Q969P5 355 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 PTCD3Q96EY7 689 aaKnown RBP10.05□□□□□ -0.8
PTPRD-207ENST00000463477 SHDQ96IW2 340 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 EPAS1Q99814 870 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 TMEM120AQ9BXJ8 343 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 OSBPL2Q9H1P3 480 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 C12orf65Q9H3J6 166 aaKnown RBP10.05□□□□□ -0.8
PTPRD-207ENST00000463477 STN1Q9H668 368 aaKnown RBP10.05□□□□□ -0.8
PTPRD-207ENST00000463477 BRD9Q9H8M2 597 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 UGT1A7Q9HAW7 530 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 UGT1A10Q9HAW8 530 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 UGT1A8Q9HAW9 530 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 CASS4Q9NQ75 786 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 HEY2Q9UBP5 337 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 DCDC2Q9UHG0 476 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 HAO1Q9UJM8 370 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 TRIM33Q9UPN9 1127 aa10.05□□□□□ -0.8
PTPRD-207ENST00000463477 TRAV19A0A0A6YYK7 116 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms