RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PRAMEF11O60813 436 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 CBFA2T3O75081 653 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 NDUFA10O95299 355 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 PRNPP04156 253 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 TBC1D3HP0C7X1 549 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 CYLC1P35663 651 aaPredicted RBP14.88□□□□□ -0.03
SF3B5-201ENST00000367569 MARCKSL1P49006 195 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 ARSEP51690 589 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 NDST2P52849 883 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 YBEYP58557 167 aaPredicted RBP14.88□□□□□ -0.03
SF3B5-201ENST00000367569 TAS2R38P59533 333 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 LLGL1Q15334 1064 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 CYTH1Q15438 398 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 SPA17Q15506 151 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 ZNF423Q2M1K9 1284 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 HLA-BQ31612 363 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 FAM46CQ5VWP2 391 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 AFMIDQ63HM1 303 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 TBC1D3GQ6DHY5 549 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 TBC1D3CQ6IPX1 549 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 TMEM139Q8IV31 216 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 RHOT2Q8IXI1 618 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 TBC1D3Q8IZP1 549 aaPredicted RBP14.88□□□□□ -0.03
SF3B5-201ENST00000367569 PNPLA1Q8N8W4 532 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 KCTD6Q8NC69 237 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 OR2T34Q8NGX1 318 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 ZCCHC14Q8WYQ9 949 aaKnown RBP14.88□□□□□ -0.03
SF3B5-201ENST00000367569 RAPGEF5Q92565 580 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 GDAP1L1Q96MZ0 367 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 EIF3CQ99613 913 aaKnown RBP14.88□□□□□ -0.03
SF3B5-201ENST00000367569 NCAPGQ9BPX3 1015 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 HEPHQ9BQS7 1158 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 PCED1AQ9H1Q7 454 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 DYRK4Q9NR20 520 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 SCML1Q9UN30 329 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 CA5BQ9Y2D0 317 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 FNDC3AQ9Y2H6 1198 aaKnown RBP14.88□□□□□ -0.03
SF3B5-201ENST00000367569 DMXL2Q8TDJ6 3036 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 CACNA1GO43497 2377 aa14.88□□□□□ -0.03
SF3B5-201ENST00000367569 ANKRD11Q6UB99 2663 aaPredicted RBP14.87□□□□□ -0.03
SF3B5-201ENST00000367569 A0A1B0GVT2 93 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 LRRC72A6NJI9 287 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 SRRM3A6NNA2 597 aaPredicted RBP14.87□□□□□ -0.03
SF3B5-201ENST00000367569 WNT9AO14904 365 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 MUSKO15146 869 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 PLRG1O43660 514 aaKnown RBP14.87□□□□□ -0.03
SF3B5-201ENST00000367569 SPOPO43791 374 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 BUB1BO60566 1050 aaPredicted RBP14.87□□□□□ -0.03
SF3B5-201ENST00000367569 MTA2O94776 668 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 IGSF6O95976 241 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 GSRP00390 522 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 FTH1P19P0C7X4 201 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 PRLRP16471 622 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 IL4RP24394 825 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 CDC25BP30305 580 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 MAN1A1P33908 653 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 ABL2P42684 1182 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 CSNK1EP49674 416 aaKnown RBP14.87□□□□□ -0.03
SF3B5-201ENST00000367569 GEMIN4P57678 1058 aaKnown RBP14.87□□□□□ -0.03
SF3B5-201ENST00000367569 NCBP2-AS2Q69YL0 99 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 ATPAF2Q8N5M1 289 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 PCDH19Q8TAB3 1148 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 VOPP1Q96AW1 172 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 ORAI3Q9BRQ5 295 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 RETREG1Q9H6L5 497 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 FZD3Q9NPG1 666 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 TM7SF3Q9NS93 570 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 IPO11Q9UI26 975 aaKnown RBP14.87□□□□□ -0.03
SF3B5-201ENST00000367569 SALL4Q9UJQ4 1053 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 PCOLCE2Q9UKZ9 415 aa14.87□□□□□ -0.03
SF3B5-201ENST00000367569 ZSCAN5CA6NGD5 496 aaPredicted RBP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 RNGTTO60942 597 aaKnown RBP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 LCA5LO95447 670 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 CER1O95813 267 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 PRKCGP05129 697 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 ZNF883P0CG24 379 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 ITIH2P19823 946 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 COMTP21964 271 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 FECHP22830 423 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 HCAR3P49019 387 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 SNRPD1P62314 119 aaKnown RBP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 DYNLT1P63172 113 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 SEMG2Q02383 582 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 SLC20A2Q08357 652 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 KIF19Q2TAC6 998 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 ANKRD20A8PQ5CZ79 823 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 SEL1L3Q68CR1 1132 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 IL27RAQ6UWB1 636 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 KDM7AQ6ZMT4 941 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 ERN2Q76MJ5 926 aaKnown RBP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 SLCO6A1Q86UG4 719 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 TSEN2Q8NCE0 465 aaKnown RBP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 SETD7Q8WTS6 366 aaKnown RBP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 ADAMTS14Q8WXS8 1223 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 KLHL32Q96NJ5 620 aa14.86□□□□□ -0.03
SF3B5-201ENST00000367569 BAG1Q99933 345 aaPredicted RBP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 CINPQ9BW66 212 aaPredicted RBP14.86□□□□□ -0.03
SF3B5-201ENST00000367569 TM9SF3Q9HD45 589 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms