RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 GDF10P55107 478 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 ENPP2Q13822 863 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 TPSAB1Q15661 275 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 ALFQ53S48 1182 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 EOGTQ5NDL2 527 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 ZC3H14Q6PJT7 736 aaKnown RBP16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 PDIK1LQ8N165 341 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 MCUQ8NE86 351 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 HMGB4Q8WW32 186 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 PRCCQ92733 491 aaPredicted RBP16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 FATE1Q969F0 183 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 SPATA13Q96N96 652 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 TSGA13Q96PP4 275 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 RBM15Q96T37 977 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 DDX50Q9BQ39 737 aaKnown RBP16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 MTG2Q9H4K7 406 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 CD93Q9NPY3 652 aa16.72■□□□□ 0.27
PDLIM1-201ENST00000329399 F5H5T6 163 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 FAM72CH0Y354 149 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 ALOX15BO15296 676 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 MFSD11O43934 449 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 LUC7L3O95232 432 aaKnown RBP16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 ZSCAN5DPP0CG00 497 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 HOXB2P14652 356 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 RHOQP17081 205 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 GABRG2P18507 467 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 MZF1P28698 734 aaPredicted RBP16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 IFFO1Q0D2I5 559 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 HIF1AQ16665 826 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 HSF5Q4G112 596 aaPredicted RBP16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 FAM72AQ5TYM5 149 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 MBLAC2Q68D91 279 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 FAM72DQ6L9T8 149 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 CXorf57Q6NSI4 855 aaKnown RBP16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 ARHGEF18Q6ZSZ5 1173 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 NUDT18Q6ZVK8 323 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 KBTBD6Q86V97 674 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 FAM72BQ86X60 149 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 FAM160A2Q8N612 972 aaPredicted RBP16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 GLIS1Q8NBF1 620 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 CPT1BQ92523 772 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 LRRC39Q96DD0 335 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 MYO19Q96H55 970 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 STMN4Q9H169 189 aaPredicted RBP16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 EIF2B3Q9NR50 452 aaKnown RBP16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 ETNK2Q9NVF9 386 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 NFS1Q9Y697 457 aa16.71■□□□□ 0.27
PDLIM1-201ENST00000329399 SPAG17Q6Q759 2223 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 IGLV3-10A0A075B6K4 115 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 A6NNZ2 444 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 ERI2A8K979 691 aaKnown RBP16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 HMGB1P1B2RPK0 211 aaPredicted RBP16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 E7ESA3 106 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 E9PAM4 449 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 AP3B1O00203 1094 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 RIPK2O43353 540 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 TCEA3O75764 348 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 SYF2O95926 243 aaKnown RBP16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 IVLP07476 585 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 MYZAPP0CAP1 466 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 ETS1P14921 441 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 CCNCP24863 283 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 CSKP41240 450 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 NDST2P52849 883 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 SIM2Q14190 667 aaPredicted RBP16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 PARP6Q2NL67 630 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 TUBB8Q3ZCM7 444 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 C5orf22Q49AR2 442 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 C6orf118Q5T5N4 469 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 TIGD7Q6NT04 549 aaPredicted RBP16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 PRR23BQ6ZRT6 265 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 CCDC25Q86WR0 208 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 CCNYQ8ND76 341 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 RPRD1AQ96P16 312 aaPredicted RBP16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 ZYG11BQ9C0D3 744 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 MPP6Q9NZW5 540 aa16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 SMG5Q9UPR3 1016 aaKnown RBP16.7■□□□□ 0.26
PDLIM1-201ENST00000329399 CCDC163A0A0D9SF12 145 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 DRGXA6NNA5 263 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 H0Y626 953 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 PSMD3O43242 534 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 SPAG6O75602 509 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 RPP40O75818 363 aaKnown RBP16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 MLNP12872 115 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 BCKDHBP21953 392 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 OAS2P29728 719 aaKnown RBP16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 GARSP41250 739 aaKnown RBP16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 MAGEA4P43358 317 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 BASP1P80723 227 aaKnown RBP16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 AP1B1Q10567 949 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 SEMA5AQ13591 1074 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 KCNJ11Q14654 390 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 ANKRD20A2Q5SQ80 823 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 ANKRD20A1Q5TYW2 823 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 AGBL2Q5U5Z8 902 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 ANKRD20A3Q5VUR7 823 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 ITPRIPL1Q6GPH6 555 aa16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 RWDD4Q6NW29 188 aaKnown RBP16.69■□□□□ 0.26
PDLIM1-201ENST00000329399 RTL3Q8N8U3 475 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms