RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 NLKQ9UBE8 527 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.54□□□□□ -1.84
VBP1-204ENST00000625964 FBXO40Q9UH90 709 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 PCDHA7Q9UN72 937 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 TRIP12Q14669 1992 aaPredicted RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 VWA3AA6NCI4 1184 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 INAFM1C9JVW0 142 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 LINC01565O15544 149 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 KIF1CO43896 1103 aaKnown RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 DHX16O60231 1041 aaKnown RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 MMP3P08254 477 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 CNPP09543 421 aaKnown RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 ENO3P13929 434 aaPredicted RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 PLA2G2AP14555 144 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 RFX5P48382 616 aaPredicted RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 PMS2P54278 862 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 PPFIA1Q13136 1202 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 ME3Q16798 604 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 FSCBQ5H9T9 825 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 NAPEPLDQ6IQ20 393 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 ZNF367Q7RTV3 350 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 ZNF329Q86UD4 541 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 NR2C2APQ86WQ0 139 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 ANKRD18AQ8IVF6 992 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 PRR26Q8N8Z3 221 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 DNAAF1Q8NEP3 725 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 SCLT1Q96NL6 688 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 GFM1Q96RP9 751 aaKnown RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 TWNKQ96RR1 684 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 NTPCRQ9BSD7 190 aaKnown RBP3.54□□□□□ -1.84
VBP1-204ENST00000625964 ATP8A2Q9NTI2 1148 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 GPR52Q9Y2T5 361 aa3.54□□□□□ -1.84
VBP1-204ENST00000625964 A0A096LPK6 155 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 EYA2O00167 538 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 VWA5AO00534 786 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 LDB2O43679 373 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 ADAP00813 363 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 CGAP01215 116 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 THPOP40225 353 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 GPR12P47775 334 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 PCYT1AP49585 367 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 RPL36AP83881 106 aaKnown RBP3.53□□□□□ -1.84
VBP1-204ENST00000625964 NFATC4Q14934 902 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 RPE65Q16518 533 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 FBXO43Q4G163 708 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 OTUD3Q5T2D3 398 aaPredicted RBP3.53□□□□□ -1.84
VBP1-204ENST00000625964 TRILQ7L0X0 811 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 TMC8Q8IU68 726 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 IQCF1Q8N6M8 205 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 MIGA1Q8NAN2 632 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 USP38Q8NB14 1042 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 RASSF8Q8NHQ8 419 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 HSPH1Q92598 858 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 TMEM18Q96B42 140 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 MROH8Q9H579 483 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 ENTPD7Q9NQZ7 604 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 CNPY2Q9Y2B0 182 aa3.53□□□□□ -1.84
VBP1-204ENST00000625964 SRPRBQ9Y5M8 271 aaKnown RBP3.53□□□□□ -1.84
VBP1-204ENST00000625964 FAM157AC9JC47 383 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 SLC25A17O43808 307 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 TSPAN3O60637 253 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 CAMTA2O94983 1202 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 SERPINC1P01008 464 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 ACAA1P09110 424 aaPredicted RBP3.52□□□□□ -1.85
VBP1-204ENST00000625964 HOXD3P31249 432 aaPredicted RBP3.52□□□□□ -1.85
VBP1-204ENST00000625964 GAS1P54826 345 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 EFR3AQ14156 821 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 TAF12Q16514 161 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 SLC18A3Q16572 532 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 ZNF284Q2VY69 593 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 SLC4A8Q2Y0W8 1093 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 INO80DQ53TQ3 878 aaPredicted RBP3.52□□□□□ -1.85
VBP1-204ENST00000625964 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.52□□□□□ -1.85
VBP1-204ENST00000625964 TBC1D22AQ8WUA7 517 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 NUDCD2Q8WVJ2 157 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 NEUROG1Q92886 237 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 SH3KBP1Q96B97 665 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 REEP2Q9BRK0 252 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 LMAN2LQ9H0V9 348 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 WDR6Q9NNW5 1121 aaKnown RBP3.52□□□□□ -1.85
VBP1-204ENST00000625964 ALKBH4Q9NXW9 302 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 CLDN16Q9Y5I7 305 aa3.52□□□□□ -1.85
VBP1-204ENST00000625964 SH2D7A6NKC9 451 aaPredicted RBP3.51□□□□□ -1.85
VBP1-204ENST00000625964 KDM4EB2RXH2 506 aaPredicted RBP3.51□□□□□ -1.85
VBP1-204ENST00000625964 EIF3FO00303 357 aaPredicted RBP3.51□□□□□ -1.85
VBP1-204ENST00000625964 ASAP2O43150 1006 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 ITM2AO43736 263 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 CHRM4P08173 479 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 HOXC6P09630 235 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 CKMT1AP12532 417 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 GNLYP22749 145 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 ARSFP54793 590 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 ABATP80404 500 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 EGR4Q05215 589 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 CRYZQ08257 329 aaKnown RBP3.51□□□□□ -1.85
VBP1-204ENST00000625964 Q0VFX4 171 aa3.51□□□□□ -1.85
VBP1-204ENST00000625964 TBL3Q12788 808 aaKnown RBP3.51□□□□□ -1.85
VBP1-204ENST00000625964 KEAP1Q14145 624 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms