RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TRIM5Q9C035 493 aa8.82□□□□□ -1
SMG6-216ENST00000575176 GOLPH3Q9H4A6 298 aa8.82□□□□□ -1
SMG6-216ENST00000575176 CATSPERBQ9H7T0 1116 aa8.82□□□□□ -1
SMG6-216ENST00000575176 ZWILCHQ9H900 591 aa8.82□□□□□ -1
SMG6-216ENST00000575176 IL21RQ9HBE5 538 aa8.82□□□□□ -1
SMG6-216ENST00000575176 RCOR3Q9P2K3 495 aaPredicted RBP8.82□□□□□ -1
SMG6-216ENST00000575176 IL36AQ9UHA7 158 aa8.82□□□□□ -1
SMG6-216ENST00000575176 IP6K2Q9UHH9 426 aa8.82□□□□□ -1
SMG6-216ENST00000575176 INTUQ9ULD6 942 aa8.82□□□□□ -1
SMG6-216ENST00000575176 ITM2BQ9Y287 266 aa8.82□□□□□ -1
SMG6-216ENST00000575176 FNDC3AQ9Y2H6 1198 aaKnown RBP8.82□□□□□ -1
SMG6-216ENST00000575176 TDRD6O60522 2096 aaKnown RBP8.82□□□□□ -1
SMG6-216ENST00000575176 ZFC3H1O60293 1989 aaKnown RBP8.81□□□□□ -1
SMG6-216ENST00000575176 A0A1B0GTW7 788 aa8.81□□□□□ -1
SMG6-216ENST00000575176 ZSCAN5CA6NGD5 496 aaPredicted RBP8.81□□□□□ -1
SMG6-216ENST00000575176 C4orf47A7E2U8 309 aa8.81□□□□□ -1
SMG6-216ENST00000575176 MEI4A8MW99 385 aa8.81□□□□□ -1
SMG6-216ENST00000575176 UPK3BL1B0FP48 263 aa8.81□□□□□ -1
SMG6-216ENST00000575176 ZNF487B1APH4 448 aa8.81□□□□□ -1
SMG6-216ENST00000575176 UPK3BL2E5RIL1 263 aa8.81□□□□□ -1
SMG6-216ENST00000575176 ARHGAP33O14559 1287 aa8.81□□□□□ -1
SMG6-216ENST00000575176 KHNYNO15037 678 aaKnown RBP8.81□□□□□ -1
SMG6-216ENST00000575176 BCAT2O15382 392 aaPredicted RBP8.81□□□□□ -1
SMG6-216ENST00000575176 MAP3K13O43283 966 aa8.81□□□□□ -1
SMG6-216ENST00000575176 BUB1BO60566 1050 aaPredicted RBP8.81□□□□□ -1
SMG6-216ENST00000575176 MAFKO60675 156 aa8.81□□□□□ -1
SMG6-216ENST00000575176 CBFA2T3O75081 653 aa8.81□□□□□ -1
SMG6-216ENST00000575176 ADRB3P13945 408 aa8.81□□□□□ -1
SMG6-216ENST00000575176 CDC25BP30305 580 aa8.81□□□□□ -1
SMG6-216ENST00000575176 DPP6P42658 865 aa8.81□□□□□ -1
SMG6-216ENST00000575176 CTSKP43235 329 aa8.81□□□□□ -1
SMG6-216ENST00000575176 GRIA4P48058 902 aa8.81□□□□□ -1
SMG6-216ENST00000575176 MARCKSL1P49006 195 aa8.81□□□□□ -1
SMG6-216ENST00000575176 ZNF135P52742 658 aaPredicted RBP8.81□□□□□ -1
SMG6-216ENST00000575176 GALNT2Q10471 571 aa8.81□□□□□ -1
SMG6-216ENST00000575176 SLC10A2Q12908 348 aaPredicted RBP8.81□□□□□ -1
SMG6-216ENST00000575176 PUM1Q14671 1186 aaKnown RBP eCLIP8.81□□□□□ -1
SMG6-216ENST00000575176 PAFAH1B3Q15102 231 aaKnown RBP8.81□□□□□ -1
SMG6-216ENST00000575176 ACCSLQ4AC99 568 aa8.81□□□□□ -1
SMG6-216ENST00000575176 AASDHQ4L235 1098 aaPredicted RBP8.81□□□□□ -1
SMG6-216ENST00000575176 BOLA3Q53S33 107 aa8.81□□□□□ -1
SMG6-216ENST00000575176 ARSIQ5FYB1 569 aa8.81□□□□□ -1
SMG6-216ENST00000575176 TPRG1LQ5T0D9 272 aa8.81□□□□□ -1
SMG6-216ENST00000575176 SEL1L3Q68CR1 1132 aa8.81□□□□□ -1
SMG6-216ENST00000575176 ALG1LQ6GMV1 187 aa8.81□□□□□ -1
SMG6-216ENST00000575176 DBX2Q6ZNG2 339 aa8.81□□□□□ -1
SMG6-216ENST00000575176 GCNT7Q6ZNI0 430 aa8.81□□□□□ -1
SMG6-216ENST00000575176 MINDY1Q8N5J2 469 aa8.81□□□□□ -1
SMG6-216ENST00000575176 PLD5Q8N7P1 536 aa8.81□□□□□ -1
SMG6-216ENST00000575176 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
SMG6-216ENST00000575176 CEP76Q8TAP6 659 aa8.81□□□□□ -1
SMG6-216ENST00000575176 CASKIN2Q8WXE0 1202 aa8.81□□□□□ -1
SMG6-216ENST00000575176 CTNNBL1Q8WYA6 563 aaPredicted RBP8.81□□□□□ -1
SMG6-216ENST00000575176 RAPGEF5Q92565 580 aa8.81□□□□□ -1
SMG6-216ENST00000575176 HSPH1Q92598 858 aa8.81□□□□□ -1
SMG6-216ENST00000575176 FUBP1Q96AE4 644 aaKnown RBP8.81□□□□□ -1
SMG6-216ENST00000575176 ECHDC3Q96DC8 303 aa8.81□□□□□ -1
SMG6-216ENST00000575176 PANX2Q96RD6 677 aa8.81□□□□□ -1
SMG6-216ENST00000575176 PPP1R9BQ96SB3 815 aa8.81□□□□□ -1
SMG6-216ENST00000575176 KLF6Q99612 283 aaPredicted RBP8.81□□□□□ -1
SMG6-216ENST00000575176 ZNF670Q9BS34 389 aa8.81□□□□□ -1
SMG6-216ENST00000575176 HERPUD2Q9BSE4 406 aa8.81□□□□□ -1
SMG6-216ENST00000575176 RTKNQ9BST9 563 aa8.81□□□□□ -1
SMG6-216ENST00000575176 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
SMG6-216ENST00000575176 PREBQ9HCU5 417 aa8.81□□□□□ -1
SMG6-216ENST00000575176 CDV3Q9UKY7 258 aaKnown RBP8.81□□□□□ -1
SMG6-216ENST00000575176 SLC6A14Q9UN76 642 aa8.81□□□□□ -1
SMG6-216ENST00000575176 FADS3Q9Y5Q0 445 aa8.81□□□□□ -1
SMG6-216ENST00000575176 A0A1B0GVT2 93 aa8.8□□□□□ -1
SMG6-216ENST00000575176 DCDC2BA2VCK2 349 aa8.8□□□□□ -1
SMG6-216ENST00000575176 C1QTNF3-AMACRE9PGA6 284 aa8.8□□□□□ -1
SMG6-216ENST00000575176 H3BRJ5 948 aa8.8□□□□□ -1
SMG6-216ENST00000575176 MYO1FO00160 1098 aa8.8□□□□□ -1
SMG6-216ENST00000575176 TRAFD1O14545 582 aaPredicted RBP8.8□□□□□ -1
SMG6-216ENST00000575176 GIPC1O14908 333 aa8.8□□□□□ -1
SMG6-216ENST00000575176 RAD51BO15315 384 aa8.8□□□□□ -1
SMG6-216ENST00000575176 AP1G1O43747 822 aa8.8□□□□□ -1
SMG6-216ENST00000575176 AKR1B10O60218 316 aa8.8□□□□□ -1
SMG6-216ENST00000575176 RNASEH1O60930 286 aaKnown RBP8.8□□□□□ -1
SMG6-216ENST00000575176 NDUFS2O75306 463 aa8.8□□□□□ -1
SMG6-216ENST00000575176 FSBPO95073 299 aa8.8□□□□□ -1
SMG6-216ENST00000575176 PIGNO95427 931 aa8.8□□□□□ -1
SMG6-216ENST00000575176 PRNPP04156 253 aa8.8□□□□□ -1
SMG6-216ENST00000575176 ITIH2P19823 946 aa8.8□□□□□ -1
SMG6-216ENST00000575176 NNMTP40261 264 aa8.8□□□□□ -1
SMG6-216ENST00000575176 FAM193AP78312 1265 aa8.8□□□□□ -1
SMG6-216ENST00000575176 GBE1Q04446 702 aa8.8□□□□□ -1
SMG6-216ENST00000575176 ADCY2Q08462 1091 aa8.8□□□□□ -1
SMG6-216ENST00000575176 SLC10A7Q0GE19 358 aa8.8□□□□□ -1
SMG6-216ENST00000575176 RALGDSQ12967 914 aa8.8□□□□□ -1
SMG6-216ENST00000575176 ZNF423Q2M1K9 1284 aa8.8□□□□□ -1
SMG6-216ENST00000575176 KIF19Q2TAC6 998 aa8.8□□□□□ -1
SMG6-216ENST00000575176 LRRC73Q5JTD7 316 aa8.8□□□□□ -1
SMG6-216ENST00000575176 WDR45BQ5MNZ6 344 aa8.8□□□□□ -1
SMG6-216ENST00000575176 SLC9A4Q6AI14 798 aa8.8□□□□□ -1
SMG6-216ENST00000575176 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.8□□□□□ -1
SMG6-216ENST00000575176 ERN2Q76MJ5 926 aaKnown RBP8.8□□□□□ -1
SMG6-216ENST00000575176 DSG4Q86SJ6 1040 aa8.8□□□□□ -1
SMG6-216ENST00000575176 VSIG1Q86XK7 387 aa8.8□□□□□ -1
SMG6-216ENST00000575176 SPATS2Q86XZ4 545 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms