RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MRGPRX2Q96LB1 330 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 GPR78Q96P69 363 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 NDNQ99608 321 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 RTKNQ9BST9 563 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 MTG1Q9BT17 334 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 PIDD1Q9HB75 910 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 SCOCQ9UIL1 159 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 FIS1Q9Y3D6 152 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 TCAF1Q9Y4C2 921 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 MYLKQ15746 1914 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 TARM1B6A8C7 271 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 MATN3O15232 486 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 HDAC3O15379 428 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 H2AFYO75367 372 aaKnown RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 CABYRO75952 493 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 DDHD2O94830 711 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 AKR1A1P14550 325 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 TFEBP19484 476 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 PRDX6P30041 224 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 ADRA1AP35348 466 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 GRIK1P39086 918 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 GPR15P49685 360 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 PAPOLAP51003 745 aaKnown RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 RAB10P61026 200 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 NSUN2Q08J23 767 aaKnown RBP eCLIP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 RBM20Q5T481 1227 aaKnown RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 MANEALQ5VSG8 457 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 FOXB2Q5VYV0 432 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 ZNF470Q6ECI4 717 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 OVOS1Q6IE37 1185 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 AAGABQ6PD74 315 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 RPS27LQ71UM5 84 aaKnown RBP10.17□□□□□ -0.78
LRRC28-216ENST00000559819 SCN4BQ8IWT1 228 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 KLHDC8BQ8IXV7 354 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 GDPD5Q8WTR4 605 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 RSPH1Q8WYR4 309 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 CHST12Q9NRB3 414 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 OSER1Q9NX31 292 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 ACOT9Q9Y305 439 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 Q9Y3F1 56 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 HS3ST4Q9Y661 456 aa10.17□□□□□ -0.78
LRRC28-216ENST00000559819 A0A1W2PQH9 124 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 MAGEA13PA6NCF6 341 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 CCL22O00626 93 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 CFLARO15519 480 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 PSMD3O43242 534 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 APOA4P06727 396 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 STMN1P16949 149 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 ZNF135P52742 658 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 ATXN3P54252 364 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 MTTPP55157 894 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 MAXP61244 160 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 FKBP1BP68106 108 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 MSLNQ13421 630 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 CNSTQ6PJW8 725 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 MRPL10Q7Z7H8 261 aaKnown RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 RNF135Q8IUD6 432 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 HEXDCQ8WVB3 486 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 USP13Q92995 863 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 RCN3Q96D15 328 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 TUBGCP5Q96RT8 1024 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 FSD1LQ9BXM9 530 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 SUDS3Q9H7L9 328 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 NSMCE4AQ9NXX6 385 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 DNAJB4Q9UDY4 337 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 MID2Q9UJV3 735 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 MTF2Q9Y483 593 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 E9PAM4 449 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 H3BNX3 289 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 TNPO2O14787 897 aaKnown RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 B4GALT3O60512 393 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 RNASEH1O60930 286 aaKnown RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 ANXA9O76027 345 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 LYNP07948 512 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 HNRNPLP14866 589 aaKnown RBP eCLIP10.16□□□□□ -0.781e-7■■■□□ 14.9
LRRC28-216ENST00000559819 AQP4P55087 323 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 IRF5Q13568 498 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 TFAP2DQ7Z6R9 452 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 PDSS2Q86YH6 399 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 CNTN4Q8IWV2 1026 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 RNF148Q8N7C7 305 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 TXNDC5Q8NBS9 432 aaKnown RBP10.16□□□□□ -0.78
LRRC28-216ENST00000559819 RDH11Q8TC12 318 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 KLHL5Q96PQ7 755 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 HAPLN3Q96S86 360 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 VCXQ9H320 206 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 CYP4F12Q9HCS2 524 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 CDYLQ9Y232 598 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 SCN4AP35499 1836 aa10.16□□□□□ -0.78
LRRC28-216ENST00000559819 COL4A4P53420 1690 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-216ENST00000559819 STX16-NPEPL1H3BU86 382 aa10.15□□□□□ -0.78
LRRC28-216ENST00000559819 GPR182O15218 404 aa10.15□□□□□ -0.78
LRRC28-216ENST00000559819 CYP11A1P05108 521 aa10.15□□□□□ -0.78
LRRC28-216ENST00000559819 HOXC13P31276 330 aa10.15□□□□□ -0.78
LRRC28-216ENST00000559819 CCR1P32246 355 aa10.15□□□□□ -0.78
LRRC28-216ENST00000559819 HADHAP40939 763 aa10.15□□□□□ -0.78
LRRC28-216ENST00000559819 CD151P48509 253 aa10.15□□□□□ -0.78
LRRC28-216ENST00000559819 GEMP55040 296 aa10.15□□□□□ -0.78
LRRC28-216ENST00000559819 PKNOX1P55347 436 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms