RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ZNF419Q96HQ0 510 aaPredicted RBP23.44■■□□□ 1.34
HOMER3-205ENST00000542541 NUDCD1Q96RS6 583 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 GLOD4Q9HC38 313 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 MMP17Q9ULZ9 603 aa23.44■■□□□ 1.34
HOMER3-205ENST00000542541 MUSKO15146 869 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 POP4O95707 220 aaKnown RBP23.43■■□□□ 1.34
HOMER3-205ENST00000542541 HOXB2P14652 356 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 MAXP61244 160 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 AP1S1P61966 158 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 DR1Q01658 176 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 GRM3Q14832 879 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 MYLK3Q32MK0 819 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 C9orf64Q5T6V5 341 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 ALG1LQ6GMV1 187 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 MAATS1Q7Z4T9 603 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 EXOC2Q96KP1 924 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 PPP1R2P1Q96PQ5 205 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 IER2Q9BTL4 223 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 CARD6Q9BX69 1037 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 COL25A1Q9BXS0 654 aaPredicted RBP23.43■■□□□ 1.34
HOMER3-205ENST00000542541 SLC25A51Q9H1U9 297 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 SCUBE2Q9NQ36 999 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 PAK5Q9P286 719 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 RSPH14Q9UHP6 348 aa23.43■■□□□ 1.34
HOMER3-205ENST00000542541 ADAM23O75077 832 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 CR2P20023 1033 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 NRLP54845 237 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 CAMK2GQ13555 558 aaPredicted RBP23.42■■□□□ 1.34
HOMER3-205ENST00000542541 ELAVL3Q14576 367 aaKnown RBP23.42■■□□□ 1.34
HOMER3-205ENST00000542541 PPP1R7Q15435 360 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 ATXN7L2Q5T6C5 722 aaPredicted RBP23.42■■□□□ 1.34
HOMER3-205ENST00000542541 DPY19L3Q6ZPD9 716 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 Q6ZS52 159 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 DSG4Q86SJ6 1040 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 SRLQ86TD4 932 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 CCHCR1Q8TD31 782 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 SEMA3CQ99985 751 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 HEPHQ9BQS7 1158 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 CHRDQ9H2X0 955 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 MTG2Q9H4K7 406 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 FBRSQ9HAH7 460 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 PCDH9Q9HC56 1237 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 PRSS16Q9NQE7 514 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 SHROOM3Q8TF72 1996 aa23.42■■□□□ 1.34
HOMER3-205ENST00000542541 ALOX15BO15296 676 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 INSIG1O15503 277 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 SIN3BO75182 1162 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 KRT14P02533 472 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 CCNHP51946 323 aaPredicted RBP23.41■■□□□ 1.34
HOMER3-205ENST00000542541 PRPSAP1Q14558 356 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 PARP6Q2NL67 630 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 SYT13Q7L8C5 426 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 OR8D1Q8WZ84 308 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 LRIG1Q96JA1 1093 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 FCRL5Q96RD9 977 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 GBA3Q9H227 469 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.41■■□□□ 1.34
HOMER3-205ENST00000542541 NFKB1P19838 968 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 CD68P34810 354 aaPredicted RBP23.41■■□□□ 1.34
HOMER3-205ENST00000542541 RGRP47804 291 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 CLCN5P51795 746 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 SPEM1Q8N4L4 309 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 TUBGCP5Q96RT8 1024 aa23.41■■□□□ 1.34
HOMER3-205ENST00000542541 CPEB1Q9BZB8 566 aaKnown RBP23.41■■□□□ 1.34
HOMER3-205ENST00000542541 EVLQ9UI08 416 aaPredicted RBP23.41■■□□□ 1.34
HOMER3-205ENST00000542541 RNASEH1O60930 286 aaKnown RBP23.4■■□□□ 1.34
HOMER3-205ENST00000542541 ANXA9O76027 345 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 PDGFBP01127 241 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-205ENST00000542541 SERPINF2P08697 491 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 AOC1P19801 751 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 RPL22P35268 128 aaKnown RBP23.4■■□□□ 1.34
HOMER3-205ENST00000542541 PTGIRP43119 386 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 DSC2Q02487 901 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 CRY1Q16526 586 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 STK40Q8N2I9 435 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 MMGT1Q8N4V1 131 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.4■■□□□ 1.34
HOMER3-205ENST00000542541 ARRDC2Q8TBH0 407 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 IMP4Q96G21 291 aaKnown RBP23.4■■□□□ 1.34
HOMER3-205ENST00000542541 NOD2Q9HC29 1040 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 IL36AQ9UHA7 158 aa23.4■■□□□ 1.34
HOMER3-205ENST00000542541 TECTAO75443 2155 aa23.39■■□□□ 1.34
HOMER3-205ENST00000542541 GOLGA6CA6NDK9 693 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 GOLGA6BA6NDN3 693 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 FAM187AA6NFU0 413 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 PRNPP04156 253 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 GOLGA6DP0CG33 693 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 ETS1P14921 441 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 FDFT1P37268 417 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 DGKEP52429 567 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 CWF19L1Q69YN2 538 aaKnown RBP23.39■■□□□ 1.33
HOMER3-205ENST00000542541 NCEH1Q6PIU2 408 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 GLIS1Q8NBF1 620 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 ZDHHC6Q9H6R6 413 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 ATP13A3Q9H7F0 1226 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 POLMQ9NP87 494 aaPredicted RBP23.39■■□□□ 1.33
HOMER3-205ENST00000542541 VPS45Q9NRW7 570 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 GOLGA6AQ9NYA3 693 aa23.39■■□□□ 1.33
HOMER3-205ENST00000542541 AAR2Q9Y312 384 aaKnown RBP23.39■■□□□ 1.33
HOMER3-205ENST00000542541 NEU2Q9Y3R4 380 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms