RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	RRP7A	Q9Y3A4	280 aa	Known RBP	4.4	□□□□□ -1.71
MATR3-223	ENST00000514402	RIPOR2	Q9Y4F9	1068 aa		4.4	□□□□□ -1.71
MATR3-223	ENST00000514402	TARSL2	A2RTX5	802 aa	Known RBP	4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	BTBD18	B2RXH4	712 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	ITM2A	O43736	263 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	DHX16	O60231	1041 aa	Known RBP	4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	DHRS4L1	P0CG22	281 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	MYF6	P23409	242 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	MT3	P25713	68 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	DCTD	P32321	178 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	FAM27E3	Q08E93	113 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	BIRC2	Q13490	618 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	PLCB4	Q15147	1175 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	ANKRD1	Q15327	319 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	ANKRD45	Q5TZF3	282 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	ANO1	Q5XXA6	986 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	ATG9B	Q674R7	924 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	DLK2	Q6UY11	383 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	FTSJ3	Q8IY81	847 aa	Known RBP	4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	TBC1D22A	Q8WUA7	517 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	CCT6B	Q92526	530 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	RTP4	Q96DX8	246 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	SLC25A33	Q9BSK2	321 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	CXorf56	Q9H5V9	222 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	IFT80	Q9P2H3	777 aa	Predicted RBP	4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	FEM1B	Q9UK73	627 aa		4.39	□□□□□ -1.71
MATR3-223	ENST00000514402	STX16-NPEPL1	H3BU86	382 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	CHL1	O00533	1208 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	STX16	O14662	325 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	KRT86	O43790	486 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	KCNJ13	O60928	360 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	SERPINI2	O75830	405 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	ADA	P00813	363 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	CHRM4	P08173	479 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	CNP	P09543	421 aa	Known RBP	4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	CKMT1A	P12532	417 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	DAO	P14920	347 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	CTPS1	P17812	591 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	RRP1	P56182	461 aa	Known RBP	4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	TBL3	Q12788	808 aa	Known RBP	4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	KRT81	Q14533	505 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	PRAMEF19	Q5SWL8	479 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	C10orf62	Q5T681	223 aa	Predicted RBP	4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	FJX1	Q86VR8	437 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	HERC6	Q8IVU3	1022 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	GHDC	Q8N2G8	530 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	TCP11L2	Q8N4U5	519 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	NKAP	Q8N5F7	415 aa	Known RBP	4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	MIGA1	Q8NAN2	632 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	ATOH1	Q92858	354 aa	Predicted RBP	4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	OTULIN	Q96BN8	352 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	RNF183	Q96D59	192 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	RNFT2	Q96EX2	444 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	ISCA1	Q9BUE6	129 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	NPFFR1	Q9GZQ6	430 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	CTDSP1	Q9GZU7	261 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	MVB12B	Q9H7P6	319 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	WDR6	Q9NNW5	1121 aa	Known RBP	4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	NLK	Q9UBE8	527 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	HDAC6	Q9UBN7	1215 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	DNAJC16	Q9Y2G8	782 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402	PCDHGB1	Q9Y5G3	927 aa		4.38	□□□□□ -1.71
MATR3-223	ENST00000514402		A0A1B0GVM2	712 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	DENND3	A2RUS2	1198 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	SLC16A5	O15375	505 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	ANP32C	O43423	234 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	TSPAN3	O60637	253 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	TCEA3	O75764	348 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	LDHA	P00338	332 aa	Known RBP	4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	TRAPPC10	P48553	1259 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	RPL36A	P83881	106 aa	Known RBP	4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	ECT2L	Q008S8	904 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	POU3F1	Q03052	451 aa	Predicted RBP	4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	SLC18A2	Q05940	514 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	ME3	Q16798	604 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	FBXO47	Q5MNV8	452 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	SH2D4B	Q5SQS7	431 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	KLHL24	Q6TFL4	600 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	DENND6A	Q8IWF6	608 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	CEP70	Q8NHQ1	597 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	HSPH1	Q92598	858 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	DUX5	Q96PT3	197 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	MMTAG2	Q9BU76	263 aa	Known RBP	4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	MSTO1	Q9BUK6	570 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	LHPP	Q9H008	270 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	VPS33B	Q9H267	617 aa		4.37	□□□□□ -1.71
MATR3-223	ENST00000514402	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.37	□□□□□ -1.71
MATR3-223	ENST00000514402		A0A0U1RQJ8	604 aa		4.36	□□□□□ -1.71
MATR3-223	ENST00000514402		A0A1B0GUV1	79 aa		4.36	□□□□□ -1.71
MATR3-223	ENST00000514402	KDM4E	B2RXH2	506 aa	Predicted RBP	4.36	□□□□□ -1.71
MATR3-223	ENST00000514402		B9A039	149 aa		4.36	□□□□□ -1.71
MATR3-223	ENST00000514402	EBAG9	O00559	213 aa		4.36	□□□□□ -1.71
MATR3-223	ENST00000514402	PPP1R3D	O95685	299 aa		4.36	□□□□□ -1.71
MATR3-223	ENST00000514402	C21orf33	P30042	268 aa	Predicted RBP	4.36	□□□□□ -1.71
MATR3-223	ENST00000514402	PTPN9	P43378	593 aa		4.36	□□□□□ -1.71
MATR3-223	ENST00000514402	BLK	P51451	505 aa		4.36	□□□□□ -1.71
MATR3-223	ENST00000514402	ARSF	P54793	590 aa		4.36	□□□□□ -1.71
MATR3-223	ENST00000514402	TUBA1B	P68363	451 aa		4.36	□□□□□ -1.71
MATR3-223	ENST00000514402	MYBPC2	Q14324	1141 aa		4.36	□□□□□ -1.71

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