RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ENC1O14682 589 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 AREL1O15033 823 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF185O15231 689 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 OPHN1O60890 802 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 CCNB1P14635 433 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 TEAD1P28347 426 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 KCNJ11Q14654 390 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 AGBL4Q5VU57 503 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 RETSATQ6NUM9 610 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF513Q8N8E2 541 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 RPLP0P6Q8NHW5 317 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 C1orf216Q8TAB5 229 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 SPATA13Q96N96 652 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 NAP1L3Q99457 506 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 CALN1Q9BXU9 219 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 MBD1Q9UIS9 605 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 SLC25A13Q9UJS0 675 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 CDC23Q9UJX2 597 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 RIMKLBQ9ULI2 386 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZFC3H1O60293 1989 aaKnown RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 ADAMTS20P59510 1910 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 ADH1BP00325 375 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 CCR3P51677 355 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 RALGDSQ12967 914 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 FRG1Q14331 258 aaKnown RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 WHAMMP3Q1A5X7 153 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 MYLK3Q32MK0 819 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 SEL1L2Q5TEA6 688 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 EMC10Q5UCC4 262 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 RFX6Q8HWS3 928 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 AADATQ8N5Z0 425 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 PIH1D2Q8WWB5 315 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 P3H4Q92791 437 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 MS4A14Q96JA4 679 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 STIM2Q9P246 746 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 SEPT3Q9UH03 358 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 SLCO3A1Q9UIG8 710 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 TPX2Q9ULW0 747 aaKnown RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 LATO43561 262 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 COILP38432 576 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 DRG2P55039 364 aaKnown RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 ACVR1Q04771 509 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 RWDD4Q6NW29 188 aaKnown RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 SRLQ86TD4 932 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 ATPAF2Q8N5M1 289 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 SORCS1Q8WY21 1168 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 MRGPRX1Q96LB2 322 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 RANBP9Q96S59 729 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 TDRD1Q9BXT4 1180 aaKnown RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 PCDH9Q9HC56 1237 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 CACNA2D2Q9NY47 1150 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 SAE1Q9UBE0 346 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 SARDHQ9UL12 918 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 H0Y858 1186 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 SIN3BO75182 1162 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 TPSB2P20231 275 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 CHRNA3P32297 505 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 SATB1Q01826 763 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 TPSAB1Q15661 275 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 TMEM259Q4ZIN3 620 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 RANBP10Q6VN20 620 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 NUDT18Q6ZVK8 323 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 TRIM69Q86WT6 500 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 CYB5D2Q8WUJ1 264 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 CELF6Q96J87 481 aaKnown RBP8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 LENG8Q96PV6 779 aaPredicted RBP8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 GLOD4Q9HC38 313 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 VPS45Q9NRW7 570 aa8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 FEZ2Q9UHY8 353 aaPredicted RBP8.4□□□□□ -1.07
CDC42SE2-208ENST00000505065 MYO15AQ9UKN7 3530 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 PROB1E7EW31 1015 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 FGGP02679 453 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 AVPR2P30518 371 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 P2RY2P41231 377 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 GNG11P61952 73 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 BYSLQ13895 437 aaKnown RBP8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 GRIN3AQ8TCU5 1115 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 UCMAQ8WVF2 138 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 MRGPRX2Q96LB1 330 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 FUT8Q9BYC5 575 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 VPS28Q9UK41 221 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 KLF8O95600 359 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 C5AR1P21730 350 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 RBL1P28749 1068 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 MMP13P45452 471 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 DLG2Q15700 870 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 NEK5Q6P3R8 708 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 ARRDC3Q96B67 414 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 OXNAD1Q96HP4 312 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 FEM1CQ96JP0 617 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 RBM12Q9NTZ6 932 aaKnown RBP8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 IL36AQ9UHA7 158 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 MYO18AQ92614 2054 aaKnown RBP8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 INSIG1O15503 277 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 POP4O95707 220 aaKnown RBP8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 NDUFV2P19404 249 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 TNFRSF8P28908 595 aa8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 EIF3EP60228 445 aaKnown RBP8.39□□□□□ -1.07
CDC42SE2-208ENST00000505065 EIF1ADQ8N9N8 165 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms