RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ATP2C2O75185 946 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 RTN3O95197 1032 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-209ENST00000486618 WARSP23381 471 aaKnown RBP7.04□□□□□ -1.28
HDAC3-209ENST00000486618 LMO2P25791 158 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 YWHAQP27348 245 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 CD6P30203 668 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 OXTRP30559 389 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 STAT1P42224 750 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 GRK6P43250 576 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 PMS1P54277 932 aaKnown RBP7.04□□□□□ -1.28
HDAC3-209ENST00000486618 STARD3Q14849 445 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 SURF1Q15526 300 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 NFKBIBQ15653 356 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 CCDC142Q17RM4 750 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 ANKDD1AQ495B1 522 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 C5orf22Q49AR2 442 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 HP1BP3Q5SSJ5 553 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-209ENST00000486618 TTC19Q6DKK2 380 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-209ENST00000486618 MCTP1Q6DN14 999 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 KIAA1324Q6UXG2 1013 aaKnown RBP7.04□□□□□ -1.28
HDAC3-209ENST00000486618 ANGPTL8Q6UXH0 198 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 CCDC80Q76M96 950 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 ZNF720Q7Z2F6 126 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 ZNF605Q86T29 641 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 NRSN1Q8IZ57 195 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 CADM4Q8NFZ8 388 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 MYCBPAPQ8TBZ2 947 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 OVCA2Q8WZ82 227 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 RAD54LQ92698 747 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 PCED1BQ96HM7 432 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 HPDLQ96IR7 371 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 ANKRD36BP1Q96IX9 119 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 DHRS1Q96LJ7 313 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 ACCSQ96QU6 501 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 FIZ1Q96SL8 496 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 MIR1-1HGQ9H1L0 117 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 CRTAC1Q9NQ79 661 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 SPHK2Q9NRA0 654 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 HPF1Q9NWY4 346 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 PSD3Q9NYI0 1048 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 RBAKQ9NYW8 714 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-209ENST00000486618 SH3BGRL2Q9UJC5 107 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 LAMP5Q9UJQ1 280 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 ACTL7BQ9Y614 415 aa7.04□□□□□ -1.28
HDAC3-209ENST00000486618 FREM2Q5SZK8 3169 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 CAPN8A6NHC0 703 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 HNRNPCL2B2RXH8 293 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 CAPN9O14815 690 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 BCAT2O15382 392 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 HCRTO43612 131 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 HNRNPCL1O60812 293 aaKnown RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 CILPO75339 1184 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 TNNC2P02585 160 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 MT-ND3P03897 115 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 F13BP05160 661 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 ATXN1LP0C7T5 689 aaKnown RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 GZMAP12544 262 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 ADSSP30520 456 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 SEMA3AQ14563 771 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 OASLQ15646 514 aaKnown RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 SLC45A4Q5BKX6 768 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 MDH1BQ5I0G3 518 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 RNF219Q5W0B1 726 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 GBP6Q6ZN66 633 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 DBX2Q6ZNG2 339 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 CCDC186Q7Z3E2 898 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 KDELC2Q7Z4H8 507 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 LIMS2Q7Z4I7 341 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 VSIG1Q86XK7 387 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 TMEM25Q86YD3 366 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 MIB1Q86YT6 1006 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 EPHX4Q8IUS5 362 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 BBS7Q8IWZ6 715 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 RBM12BQ8IXT5 1001 aaKnown RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 PEX5LQ8IYB4 626 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 TBC1D21Q8IYX1 336 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 SYCP3Q8IZU3 236 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 NUP93Q8N1F7 819 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 ZCCHC9Q8N567 271 aaKnown RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 OR52K2Q8NGK3 314 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 PPP1R14CQ8TAE6 165 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 BAHD1Q8TBE0 780 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 NOC3LQ8WTT2 800 aaKnown RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 KBTBD7Q8WVZ9 684 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 LARP4BQ92615 738 aaKnown RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 FBXO32Q969P5 355 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 SAAL1Q96ER3 474 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 TOE1Q96GM8 510 aaKnown RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 RADILQ96JH8 1075 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 MRGPRX1Q96LB2 322 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 MMS19Q96T76 1030 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 GABRG3Q99928 467 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 GPR174Q9BXC1 333 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 ELOVL4Q9GZR5 314 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 SNX25Q9H3E2 840 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 KCTD10Q9H3F6 313 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 VPS37BQ9H9H4 285 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 MRPL44Q9H9J2 332 aaKnown RBP7.03□□□□□ -1.28
HDAC3-209ENST00000486618 ZFYVE1Q9HBF4 777 aa7.03□□□□□ -1.28
HDAC3-209ENST00000486618 ITM2CQ9NQX7 267 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms