RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 HIBCHQ6NVY1 386 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 GRASPQ7Z6J2 395 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 PRCCQ92733 491 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 TDP1Q9NUW8 608 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 SYBUQ9NX95 663 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 EVLQ9UI08 416 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 PCDHA11Q9Y5I1 949 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 FER1L6Q2WGJ9 1857 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 TMEM189-UBE2V1I3L0A0 370 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 NDST3O95803 873 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 RB1P06400 928 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 PTPN3P26045 913 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 DDX6P26196 483 aaKnown RBP eCLIP12.16□□□□□ -0.46
PCCB-214ENST00000478469 LRRC8BQ6P9F7 803 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 TEKT5Q96M29 485 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 FBXO5Q9UKT4 447 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 GJB5O95377 273 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 AP2A1O95782 977 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 EN2P19622 333 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 ABCG1P45844 678 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 DSC2Q02487 901 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 SLC20A2Q08357 652 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 CERCAMQ5T4B2 595 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 DCAF12L1Q5VU92 463 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 TRIM48Q8IWZ4 208 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 NCKIPSDQ9NZQ3 722 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 FAM95CA0A1B0GW59 222 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 NCF1BA6NI72 391 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 NCF1CA8MVU1 366 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 H3BQF6 201 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 UGT2B4P06133 528 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 TPBGLP0DKB5 382 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 NCF1P14598 390 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 FSHRP23945 695 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 BOP1Q14137 746 aaKnown RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 N4BP2L1Q5TBK1 243 aaPredicted RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 EFL1Q7Z2Z2 1120 aaKnown RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 SPATA22Q8NHS9 363 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 TCP10LQ8TDR4 215 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 CXorf40AQ8TE69 158 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 ZNF473Q8WTR7 871 aaKnown RBP12.16□□□□□ -0.46
PCCB-214ENST00000478469 HDAC10Q969S8 669 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 RAD18Q9NS91 495 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 CTNNAL1Q9UBT7 734 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 HS3ST4Q9Y661 456 aa12.16□□□□□ -0.46
PCCB-214ENST00000478469 TCRBV9S1A1TA0A576 114 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 SASH3O75995 380 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 NUDT17P0C025 328 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 GRK2P25098 689 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 FMO4P31512 558 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 DGKGP49619 791 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 DSC3Q14574 896 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 SH2D4BQ5SQS7 431 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 LHX8Q68G74 356 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 KIAA1324Q6UXG2 1013 aaKnown RBP12.15□□□□□ -0.46
PCCB-214ENST00000478469 LRRTM3Q86VH5 581 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 OVCA2Q8WZ82 227 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 ACDQ96AP0 544 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 CYP2S1Q96SQ9 504 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 UNKQ9C0B0 810 aaKnown RBP12.15□□□□□ -0.46
PCCB-214ENST00000478469 BPIFA1Q9NP55 256 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
PCCB-214ENST00000478469 RAI2Q9Y5P3 530 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 CAP1Q01518 475 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 CBX2Q14781 532 aaPredicted RBP12.15□□□□□ -0.46
PCCB-214ENST00000478469 PDE12Q6L8Q7 609 aaKnown RBP12.15□□□□□ -0.46
PCCB-214ENST00000478469 ANGPTL8Q6UXH0 198 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 MYO19Q96H55 970 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 MFSD1Q9H3U5 465 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 GRIN2DO15399 1336 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 PHGDHO43175 533 aaKnown RBP12.15□□□□□ -0.46
PCCB-214ENST00000478469 PIAS1O75925 651 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 FAM107AO95990 144 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 SHBGP04278 402 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 SERPIND1P05546 499 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 CTSAP10619 480 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 CTGFP29279 349 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 TTPAP49638 278 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 KDSRQ06136 332 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 RAB33AQ14088 237 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 EFTUD2Q15029 972 aaKnown RBP eCLIP12.15□□□□□ -0.461e-8■■■■■ 41.2
PCCB-214ENST00000478469 AFTPHQ6ULP2 937 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 GPRIN1Q7Z2K8 1008 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 SLC22A17Q8WUG5 538 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 CASD1Q96PB1 797 aa12.15□□□□□ -0.46
PCCB-214ENST00000478469 MAP2K7O14733 419 aa12.14□□□□□ -0.47
PCCB-214ENST00000478469 ANP32DO95626 131 aa12.14□□□□□ -0.47
PCCB-214ENST00000478469 MT-CYBP00156 380 aaPredicted RBP12.14□□□□□ -0.47
PCCB-214ENST00000478469 PTGIRP43119 386 aa12.14□□□□□ -0.47
PCCB-214ENST00000478469 MAPRE2Q15555 327 aa12.14□□□□□ -0.47
PCCB-214ENST00000478469 RNASEH2BQ5TBB1 312 aaKnown RBP12.14□□□□□ -0.47
PCCB-214ENST00000478469 NCBP2-AS2Q69YL0 99 aa12.14□□□□□ -0.47
PCCB-214ENST00000478469 SLC39A11Q8N1S5 342 aa12.14□□□□□ -0.47
PCCB-214ENST00000478469 APOPT1Q96IL0 206 aa12.14□□□□□ -0.47
PCCB-214ENST00000478469 RPL10LQ96L21 214 aaKnown RBP12.14□□□□□ -0.47
PCCB-214ENST00000478469 TMLHEQ9NVH6 421 aa12.14□□□□□ -0.47
PCCB-214ENST00000478469 LNPEPQ9UIQ6 1025 aa12.14□□□□□ -0.47
PCCB-214ENST00000478469 PCDHGC4Q9Y5F7 938 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms