RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 RIMS3Q9UJD0 308 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 GTF3C4Q9UKN8 822 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 MYRFQ9Y2G1 1151 aa13.27□□□□□ -0.28
DDX56-206ENST00000446987 MTCL1Q9Y4B5 1905 aaKnown RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 PRR5-ARHGAP8B1AHC4 643 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 M0QZQ0 153 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 AREL1O15033 823 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 PER2O15055 1255 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 TRIM49P0CI25 452 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 TRIM49CP0CI26 452 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 CCDC130P13994 396 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 JAK1P23458 1154 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 LILRA4P59901 499 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 ARHGAP8P85298 464 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 KLF1Q13351 362 aaPredicted RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 DPYSQ14117 519 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 OXA1LQ15070 435 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 DUSP6Q16828 381 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 HSF5Q4G112 596 aaPredicted RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 DCAF17Q5H9S7 520 aaPredicted RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 FAM171A1Q5VUB5 890 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 AGAP7PQ5VUJ5 663 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 TDRD10Q5VZ19 366 aaKnown RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 PDE12Q6L8Q7 609 aaKnown RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 PRSS55Q6UWB4 352 aaPredicted RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 RSPO2Q6UXX9 243 aaPredicted RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 SLC7A5P1Q8MH63 180 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 PPM1KQ8N3J5 372 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 POU5F2Q8N7G0 328 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 ZNF564Q8TBZ8 553 aaPredicted RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 TMC2Q8TDI7 906 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 C12orf43Q96C57 262 aaKnown RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 FERMT1Q9BQL6 677 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 OSBPL11Q9BXB4 747 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 EHD1Q9H4M9 534 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 VPS37BQ9H9H4 285 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 MKS1Q9NXB0 559 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 SLC17A7Q9P2U7 560 aa13.27□□□□□ -0.29
DDX56-206ENST00000446987 PRPF19Q9UMS4 504 aaKnown RBP13.27□□□□□ -0.29
DDX56-206ENST00000446987 IQANK1A0A1B0GTG1 560 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 WDR91A4D1P6 747 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 PSMD12O00232 456 aaPredicted RBP13.26□□□□□ -0.29
DDX56-206ENST00000446987 ADAM12O43184 909 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 TBC1D4O60343 1298 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 SNAP91O60641 907 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 VNN1O95497 513 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 CNPP09543 421 aaKnown RBP13.26□□□□□ -0.29
DDX56-206ENST00000446987 TMEM191BP0C7N4 346 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 LTBRP36941 435 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 NRIP1P48552 1158 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 PPP3CAQ08209 521 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 BFSP1Q12934 665 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 PDIA2Q13087 525 aaKnown RBP13.26□□□□□ -0.29
DDX56-206ENST00000446987 MRPL58Q14197 206 aaKnown RBP13.26□□□□□ -0.29
DDX56-206ENST00000446987 SURF1Q15526 300 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 WDR75Q8IWA0 830 aaKnown RBP13.26□□□□□ -0.29
DDX56-206ENST00000446987 SPERTQ8NA61 448 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 FEZF2Q8TBJ5 459 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 CALML6Q8TD86 181 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 CMTM5Q96DZ9 223 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 PWWP2AQ96N64 755 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 RETREG1Q9H6L5 497 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 VPS28Q9UK41 221 aa13.26□□□□□ -0.29
DDX56-206ENST00000446987 A0A087WXM4 84 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 KRBA1A5PL33 1030 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 TRIM64A6NGJ6 449 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 GOLGA8CPA6NN73 597 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 CFAP99D6REC4 459 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 SLC34A2O95436 690 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 CXCL14O95715 111 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 CST3P01034 146 aaPredicted RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 C4BPAP04003 597 aaKnown RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 URODP06132 367 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 TFPTP0C1Z6 253 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 RPL17P18621 184 aaKnown RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 BGNP21810 368 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 DCKP27707 260 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 PSMC2P35998 433 aaKnown RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 DLX2Q07687 328 aaPredicted RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 DMPKQ09013 629 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 LSM12Q3MHD2 195 aaKnown RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 ITPRIPL1Q6GPH6 555 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 GJB7Q6PEY0 223 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 LINC00299Q6ZSB3 139 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 VASH1Q7L8A9 365 aaPredicted RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 RBM23Q86U06 439 aaKnown RBP13.25□□□□□ -0.29
DDX56-206ENST00000446987 CARM1Q86X55 608 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 GPR65Q8IYL9 337 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 LILRB4Q8NHJ6 448 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 KLHL5Q96PQ7 755 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 TTPALQ9BTX7 342 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 XYLT2Q9H1B5 865 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 STK39Q9UEW8 545 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 N6AMT1Q9Y5N5 214 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 C2orf16Q68DN1 1984 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 NOTOA8MTQ0 251 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 TEX28O15482 410 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 UGT1A9O60656 530 aa13.25□□□□□ -0.29
DDX56-206ENST00000446987 MT-ND3P03897 115 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms