RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 A0A0D9SEW6 157 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 E7ESA3 106 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 RHOCP08134 193 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 RBL1P28749 1068 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 HTR7P34969 479 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 MAGEA6P43360 314 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 TNFRSF4P43489 277 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 GNGT1P63211 74 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 BASP1P80723 227 aaKnown RBP15.9■□□□□ 0.14
SHOX2-202ENST00000425436 PAFAH1B3Q15102 231 aaKnown RBP15.9■□□□□ 0.14
SHOX2-202ENST00000425436 RASA2Q15283 850 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 FUT11Q495W5 492 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 PREPLQ4J6C6 727 aaPredicted RBP15.9■□□□□ 0.14
SHOX2-202ENST00000425436 RNF219Q5W0B1 726 aaPredicted RBP15.9■□□□□ 0.14
SHOX2-202ENST00000425436 Q6ZS52 159 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 RFX8Q6ZV50 586 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 ADIPOR2Q86V24 386 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 SUGP1Q8IWZ8 645 aaKnown RBP15.9■□□□□ 0.14
SHOX2-202ENST00000425436 PYROXD1Q8WU10 500 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 CENPTQ96BT3 561 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 QKIQ96PU8 341 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHOX2-202ENST00000425436 CIPCQ9C0C6 399 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 HCN2Q9UL51 889 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 TBC1D30Q9Y2I9 924 aa15.9■□□□□ 0.14
SHOX2-202ENST00000425436 PPP1R12AO14974 1030 aaPredicted RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 SPAG6O75602 509 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 ERCC2P18074 760 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 AOC1P19801 751 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 AMPD1P23109 780 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 HOXC13P31276 330 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 HPDP32754 393 aaPredicted RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 TIE1P35590 1138 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 SARNPP82979 210 aaKnown RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 PDIA2Q13087 525 aaKnown RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 DNAJC21Q5F1R6 531 aaKnown RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 PITRM1Q5JRX3 1037 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 DGKKQ5KSL6 1271 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 NCBP2-AS2Q69YL0 99 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 HEATR6Q6AI08 1181 aaKnown RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 PKN3Q6P5Z2 889 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 NUDT18Q6ZVK8 323 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 KIAA0907Q7Z7F0 614 aaPredicted RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 TDRPQ86YL5 185 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 ATP11CQ8NB49 1132 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 NETO2Q8NC67 525 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 CYB5D2Q8WUJ1 264 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 FEM1AQ9BSK4 669 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 MUC3BQ9H195 1237 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 CATSPERBQ9H7T0 1116 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 POLR3BQ9NW08 1133 aaPredicted RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 TMEM248Q9NWD8 314 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 ELOVL2Q9NXB9 296 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 DTLQ9NZJ0 730 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 LGALS13Q9UHV8 139 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 MFHAS1Q9Y4C4 1052 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 MTSS1O43312 755 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 MX2P20592 715 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 FDFT1P37268 417 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 KIR2DL1P43626 348 aaPredicted RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 ATP1A2P50993 1020 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 CLCN5P51795 746 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 CDK16Q00536 496 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 LRRC32Q14392 662 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 GAS6Q14393 721 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 MBLAC2Q68D91 279 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 BMP8AQ7Z5Y6 402 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 SETD3Q86TU7 594 aaPredicted RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 ZBED8Q8IZ13 594 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 AHI1Q8N157 1196 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 FBXL6Q8N531 539 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 CCDC33Q8N5R6 958 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 RTL3Q8N8U3 475 aaKnown RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 TMEM105Q8N8V8 129 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 ZNF557Q8N988 423 aaPredicted RBP15.89■□□□□ 0.13
SHOX2-202ENST00000425436 MCUQ8NE86 351 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 OR7D4Q8NG98 312 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 RPLP0P6Q8NHW5 317 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 CLDN23Q96B33 292 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 LRRC39Q96DD0 335 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 ALG14Q96F25 216 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 C9orf72Q96LT7 481 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 OLFM3Q96PB7 478 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 ACOX2Q99424 681 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 OSBPL6Q9BZF3 934 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 RAB6BQ9NRW1 208 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 SLC24A2Q9UI40 661 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 ACTL7BQ9Y614 415 aa15.89■□□□□ 0.13
SHOX2-202ENST00000425436 FGF10O15520 208 aaPredicted RBP15.88■□□□□ 0.13
SHOX2-202ENST00000425436 GPR37L1O60883 481 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 POLR2EP19388 210 aaKnown RBP15.88■□□□□ 0.13
SHOX2-202ENST00000425436 SERPINB6P35237 376 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 WASP42768 502 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 CTSOP43234 321 aaPredicted RBP15.88■□□□□ 0.13
SHOX2-202ENST00000425436 MMP13P45452 471 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 GBE1Q04446 702 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 DPYSQ14117 519 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 KCNJ11Q14654 390 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 PLEKHG6Q3KR16 790 aa15.88■□□□□ 0.13
SHOX2-202ENST00000425436 EGFLAMQ63HQ2 1017 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms