RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 IL36AQ9UHA7 158 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 CACNA1HO95180 2353 aa17.04■□□□□ 0.32
HMGA1P7-201ENST00000406908 HACD1B0YJ81 288 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 KRIT1O00522 736 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 MID1O15344 667 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 LEFTY1O75610 366 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 RBP3P10745 1247 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 CR2P20023 1033 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 PSMD8P48556 350 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 CSNK1DP48730 415 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 NRLP54845 237 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 ETF1P62495 437 aaKnown RBP17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 SIX1Q15475 284 aaPredicted RBP17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 SLC45A4Q5BKX6 768 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 PAPD7Q5XG87 772 aaKnown RBP17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 DSG4Q86SJ6 1040 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 SRLQ86TD4 932 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 BBS5Q8N3I7 341 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 RASGEF1CQ8N431 466 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 CNTD1Q8N815 330 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 TMIEQ8NEW7 156 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 SLC35B2Q8TB61 432 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 GRIN3AQ8TCU5 1115 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 RLN3Q8WXF3 142 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 QKIQ96PU8 341 aaKnown RBP eCLIP17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 NAPGQ99747 312 aaPredicted RBP17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 PRRX2Q99811 253 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 MGME1Q9BQP7 344 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 FAM126AQ9BYI3 521 aaPredicted RBP17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 CEP41Q9BYV8 373 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 PABPC3Q9H361 631 aaKnown RBP17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZDHHC6Q9H6R6 413 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 ITM2CQ9NQX7 267 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 INVSQ9Y283 1065 aa17.03■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZNF185O15231 689 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 DNTTP04053 509 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 PRNPP04156 253 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 HLA-DQB2P05538 268 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 C5AR1P21730 350 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 RBL1P28749 1068 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 HSPA9P38646 679 aaKnown RBP17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 SCNN1BP51168 640 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZBTB16Q05516 673 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 WASHC5Q12768 1159 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 LONRF2Q1L5Z9 754 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 MAP7D1Q3KQU3 841 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 POM121L1PQ3SYA9 428 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 FAM46CQ5VWP2 391 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 DARS2Q6PI48 645 aaKnown RBP17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 NYAP1Q6ZVC0 841 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 FRMD1Q8N878 549 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZBTB44Q8NCP5 570 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 HTR3CQ8WXA8 447 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 ATG4AQ8WYN0 398 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 ARRDC3Q96B67 414 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 USP29Q9HBJ7 922 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 ZSCAN32Q9NX65 697 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 SEPT10Q9P0V9 454 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 USP36Q9P275 1121 aaKnown RBP17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 DNPEPQ9ULA0 475 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 ATP8A1Q9Y2Q0 1164 aa17.02■□□□□ 0.32
HMGA1P7-201ENST00000406908 CTAGE9A4FU28 777 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 C1QTNF3-AMACRE9PGA6 284 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 PLK4O00444 970 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 KPNA3O00505 521 aaPredicted RBP17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 HRO43593 1189 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 ADH1BP00325 375 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 ACADMP11310 421 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 PRLRP16471 622 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 TCP1P17987 556 aaKnown RBP17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 PTPN3P26045 913 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 TPMTP51580 245 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 RAD51Q06609 339 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 ITKQ08881 620 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 SRSF5Q13243 272 aaKnown RBP17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 IHHQ14623 411 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 TEX44Q53QW1 395 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 NCEH1Q6PIU2 408 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 SYT10Q6XYQ8 523 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 HDDC3Q8N4P3 179 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 AADATQ8N5Z0 425 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 FAM160A2Q8N612 972 aaPredicted RBP17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 C1orf54Q8WWF1 131 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 LRIG1Q96JA1 1093 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 AGAP3Q96P47 875 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 NUDCD1Q96RS6 583 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 SEMA3CQ99985 751 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 CPEB1Q9BZB8 566 aaKnown RBP17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 NOD2Q9HC29 1040 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 FBXL12Q9NXK8 326 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 SMARCAL1Q9NZC9 954 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 SERGEFQ9UGK8 458 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 AMACRQ9UHK6 382 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 TTC7AQ9ULT0 858 aaPredicted RBP17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 CYP8B1Q9UNU6 501 aa17.01■□□□□ 0.31
HMGA1P7-201ENST00000406908 NUMA1Q14980 2115 aa17■□□□□ 0.31
HMGA1P7-201ENST00000406908 A0A1W2PP55 124 aa17■□□□□ 0.31
HMGA1P7-201ENST00000406908 BCLAF3A2AJT9 711 aaKnown RBP17■□□□□ 0.31
HMGA1P7-201ENST00000406908 CES2O00748 559 aa17■□□□□ 0.31
HMGA1P7-201ENST00000406908 MTSS1O43312 755 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms