RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 QKIQ96PU8 341 aaKnown RBP eCLIP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 KLHL33A6NCF5 533 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 BBIP1A8MTZ0 92 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 KCNK1O00180 336 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 IL6P05231 212 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 PEX2P28328 305 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 CNTN2Q02246 1040 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 FUT2Q10981 343 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 ARHGAP15Q53QZ3 475 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 CYP4Z2PQ8N1L4 340 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 TTC30BQ8N4P2 665 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 UNKQ9C0B0 810 aaKnown RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 CXorf21Q9HAI6 301 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 MOV10Q9HCE1 1003 aaKnown RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 ACP6Q9NPH0 428 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 GRHL1Q9NZI5 618 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 INVSQ9Y283 1065 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 RWDD3Q9Y3V2 267 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 EME2A4GXA9 379 aaPredicted RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 LTA4HP09960 611 aaKnown RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 PDCD4Q53EL6 469 aaKnown RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 PNPT1Q8TCS8 783 aaKnown RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 TSEN34Q9BSV6 310 aaKnown RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 TMEM39AQ9NV64 488 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 PRKAG3Q9UGI9 489 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 WBP11Q9Y2W2 641 aaKnown RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 MGAT4DA6NG13 374 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 MYL12BO14950 172 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 BANF1O75531 89 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 B3GAT3O94766 335 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 MICAL2O94851 1124 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 PTGIRP43119 386 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 ZNF143P52747 638 aaPredicted RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 LY6KQ17RY6 165 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 FGD2Q7Z6J4 655 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 C10orf107Q8IVU9 208 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 MRPL57Q9BQC6 102 aaKnown RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 DOLKQ9UPQ8 538 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 GSTK1Q9Y2Q3 226 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 GPC6Q9Y625 555 aaPredicted RBP19.9■□□□□ 0.78
SHANK1-203ENST00000391813 WASF2Q9Y6W5 498 aa19.9■□□□□ 0.78
SHANK1-203ENST00000391813 SIN3BO75182 1162 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 PWP1Q13610 501 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 ANGPT1Q15389 498 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 MGAT5BQ3V5L5 792 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 NEPROQ6NW34 567 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 SPESP1Q6UW49 350 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 NECAB2Q7Z6G3 386 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 SIX5Q8N196 739 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 ASB7Q9H672 318 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 SETD4Q9NVD3 440 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 PNPOQ9NVS9 261 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 GMPPBQ9Y5P6 360 aa19.89■□□□□ 0.78
SHANK1-203ENST00000391813 ZNF541Q9H0D2 1346 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 CLDN25C9JDP6 229 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 TBX10O75333 385 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 MYL12AP19105 171 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 PLK1P53350 603 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 QPRTQ15274 297 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 FAM110CQ1W6H9 321 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 SLCO6A1Q86UG4 719 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 MCFD2Q8NI22 146 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 ZNF570Q96NI8 536 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 ACOX2Q99424 681 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 EBF3Q9H4W6 596 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 PLK2Q9NYY3 685 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 RAB25P57735 213 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 ZNF280AP59817 542 aaPredicted RBP19.89■□□□□ 0.77
SHANK1-203ENST00000391813 ILDR2Q71H61 639 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 CNTD1Q8N815 330 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 TRMOQ9BU70 441 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 CEP41Q9BYV8 373 aa19.89■□□□□ 0.77
SHANK1-203ENST00000391813 KRCC1Q9NPI7 259 aaPredicted RBP19.89■□□□□ 0.77
SHANK1-203ENST00000391813 DNAAF2Q9NVR5 837 aaKnown RBP19.89■□□□□ 0.77
SHANK1-203ENST00000391813 PIH1D1Q9NWS0 290 aaKnown RBP19.89■□□□□ 0.77
SHANK1-203ENST00000391813 LYPLA1O75608 230 aaPredicted RBP19.88■□□□□ 0.77
SHANK1-203ENST00000391813 CPSF4O95639 269 aaKnown RBP19.88■□□□□ 0.77
SHANK1-203ENST00000391813 GSSP48637 474 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 RENBPP51606 427 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 SLC7A2P52569 658 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 SLC18A1P54219 525 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 TAS2R40P59535 323 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 YWHAZP63104 245 aaKnown RBP19.88■□□□□ 0.77
SHANK1-203ENST00000391813 DDX39BQ13838 428 aaKnown RBP19.88■□□□□ 0.77
SHANK1-203ENST00000391813 FAM187BQ17R55 369 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 HERC6Q8IVU3 1022 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 ZNF540Q8NDQ6 660 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 MUC3BQ9H195 1237 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 KLHL31Q9H511 634 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 THP07101 528 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 DBTP11182 482 aaKnown RBP19.88■□□□□ 0.77
SHANK1-203ENST00000391813 PPP4R4Q6NUP7 873 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 SEPT5Q99719 369 aaPredicted RBP19.88■□□□□ 0.77
SHANK1-203ENST00000391813 TRIM43BA6NCK2 446 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 URODP06132 367 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 NDST1P52848 882 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 FBXO30Q8TB52 745 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 KCNH1O95259 989 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 LRG1P02750 347 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms