RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ZNF189O75820 626 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 URI1O94763 535 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 ALDH1A2O94788 518 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 PAPSS2O95340 614 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 APBB3O95704 486 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 POP4O95707 220 aaKnown RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 GABRG2P18507 467 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 GKP32189 559 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 CHRNA3P32297 505 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 HSPA9P38646 679 aaKnown RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 CSNK1DP48730 415 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 SCNN1BP51168 640 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 OASLQ15646 514 aaKnown RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 TEX44Q53QW1 395 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZNF776Q68DI1 518 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 ANO7Q6IWH7 933 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 DSG4Q86SJ6 1040 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 CACUL1Q86Y37 369 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 TMPRSS6Q8IU80 811 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 MMAAQ8IVH4 418 aaKnown RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 C1orf210Q8IVY1 113 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 PGBD3Q8N328 593 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 CNTD1Q8N815 330 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 HMGB4Q8WW32 186 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 NKD2Q969F2 451 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 HEPHQ9BQS7 1158 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 TMEM121Q9BTD3 319 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 POLR1EQ9GZS1 481 aaKnown RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 MKRN2Q9H000 416 aaKnown RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 RSPH9Q9H1X1 276 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 USP29Q9HBJ7 922 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 SCUBE2Q9NQ36 999 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 KLHL8Q9P2G9 620 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 RNF14Q9UBS8 474 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 IL36AQ9UHA7 158 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZNF148Q9UQR1 794 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 ATP8A1Q9Y2Q0 1164 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 KMT2EQ8IZD2 1858 aa14.28□□□□□ -0.12
APOBEC3B-202ENST00000335760 GOLGA6L10A0A0M3HER8 536 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 CFAP69A5D8W1 941 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 ALOX15BO15296 676 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 STK10O94804 968 aaKnown RBP14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 IL1BP01584 269 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 CTSLP07711 333 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 NDUFV2P19404 249 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 PSMD8P48556 350 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 NRLP54845 237 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 RPS14P62263 151 aaKnown RBP14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 RAD51Q06609 339 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 ARSIQ5FYB1 569 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 DRICH1Q6PGQ1 229 aaPredicted RBP14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 TSSK4Q6SA08 328 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 KIAA1324Q6UXG2 1013 aaKnown RBP14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 PID1Q7Z2X4 250 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 ZNF567Q8N184 647 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 CAMKK1Q8N5S9 505 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 FAM71DQ8N9W8 422 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 KIF18AQ8NI77 898 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 PIP4K2CQ8TBX8 421 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 GRIN3AQ8TCU5 1115 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 PRCCQ92733 491 aaPredicted RBP14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 MAGOHBQ96A72 148 aaKnown RBP14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 SIPA1Q96FS4 1042 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 MRGPRX1Q96LB2 322 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 TEKT5Q96M29 485 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 NUDCD1Q96RS6 583 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 VAT1Q99536 393 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 SEMA3CQ99985 751 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 LRFN3Q9BTN0 628 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 PRMT8Q9NR22 394 aaPredicted RBP14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 PPM1HQ9ULR3 514 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 WASF2Q9Y6W5 498 aa14.27□□□□□ -0.12
APOBEC3B-202ENST00000335760 ESPNB1AK53 854 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 C1QTNF3-AMACRE9PGA6 284 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 PDE2AO00408 941 aaPredicted RBP14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 LEFTY1O75610 366 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 PRNPP04156 253 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 ITGAVP06756 1048 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 CR2P20023 1033 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 KCNJ1P48048 391 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 PXNP49023 591 aaPredicted RBP14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 GDF10P55107 478 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 AP1S1P61966 158 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 DSC2Q02487 901 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 CSTF1Q05048 431 aaKnown RBP14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 POM121L1PQ3SYA9 428 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 MAML2Q8IZL2 1156 aaPredicted RBP14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 C12orf50Q8NA57 414 aaPredicted RBP14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 TMIEQ8NEW7 156 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 MDGA1Q8NFP4 955 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 NOD2Q9HC29 1040 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 GLOD4Q9HC38 313 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 TRHDEQ9UKU6 1024 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 SARDHQ9UL12 918 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 DRG1Q9Y295 367 aaKnown RBP14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 CUL9Q8IWT3 2517 aa14.26□□□□□ -0.13
APOBEC3B-202ENST00000335760 C5orf60A6NFR6 353 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 KPNA3O00505 521 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms