RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 SEL1L3Q68CR1 1132 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 ANKS6Q68DC2 871 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 PARS2Q7L3T8 475 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 TMEM135Q86UB9 458 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 MFN1Q8IWA4 741 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 IGSF22Q8N9C0 903 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 CHDHQ8NE62 594 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 FRS2Q8WU20 508 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 KCTD13Q8WZ19 329 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 OR8D1Q8WZ84 308 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 ZNF274Q96GC6 653 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 TNIP3Q96KP6 325 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 LENG8Q96PV6 779 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 FAM213AQ9BRX8 229 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 ZPBPQ9BS86 351 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 SLC17A9Q9BYT1 436 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 RDH14Q9HBH5 336 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 MCCC2Q9HCC0 563 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 PDE11AQ9HCR9 933 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 PNPLA8Q9NP80 782 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 INTS13Q9NVM9 706 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 RBAKQ9NYW8 714 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 MARCH2Q9P0N8 246 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 RCOR3Q9P2K3 495 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 GPR34Q9UPC5 381 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 RPS6KL1Q9Y6S9 549 aa6.78□□□□□ -1.32
HERPUD1-217ENST00000569429 TGP01266 2768 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 NPHP3-ACAD11A0A0J9YXS1 232 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 FPGTO14772 594 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 MCF2LO15068 1137 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 NUDT21O43809 227 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 TBL1XO60907 577 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 CDKL5O76039 1030 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 PCDH8O95206 1070 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 DLGAP3O95886 979 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 CSTF2P33240 577 aaKnown RBP eCLIP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 NNMTP40261 264 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 BLKP51451 505 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 LIMK2P53671 638 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 RPS21P63220 83 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 PPARDQ03181 441 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 CDK18Q07002 472 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 FOXM1Q08050 763 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 CHRNA6Q15825 494 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 EDRF1Q3B7T1 1238 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 ARSHQ5FYA8 562 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 PITRM1Q5JRX3 1037 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 FAXCQ5TGI0 409 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 RNF219Q5W0B1 726 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 KRT79Q5XKE5 535 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 OGFOD3Q6PK18 319 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 BIVMQ86UB2 503 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 ZSCAN30Q86W11 494 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 CCDC117Q8IWD4 279 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 RHOT1Q8IXI2 618 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 CISD2Q8N5K1 135 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 ESX1Q8N693 406 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 MYCT1Q8N699 235 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 BMPERQ8N8U9 685 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 ZSWIM2Q8NEG5 633 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 DENND6BQ8NEG7 585 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 OR5B17Q8NGF7 314 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 ITLN2Q8WWU7 325 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 NDRG1Q92597 394 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 KCNB2Q92953 911 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 RPL10LQ96L21 214 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 CCDC74BQ96LY2 380 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 JAKMIP1Q96N16 626 aaKnown RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 KLF6Q99612 283 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 RAB34Q9BZG1 259 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 EDEM3Q9BZQ6 932 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 ST6GALNAC4Q9H4F1 302 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 PARVGQ9HBI0 331 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 OCIAD1Q9NX40 245 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 USP3Q9Y6I4 520 aa6.77□□□□□ -1.33
HERPUD1-217ENST00000569429 CDC14CA4D256 554 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 IRAK2O43187 625 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 B4GAT1O43505 415 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 CEACAM4O75871 244 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 STK17BO94768 372 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 PRPF6O94906 941 aaKnown RBP6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 MOCS3O95396 460 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 CST3P01034 146 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 TNNC2P02585 160 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 STSP08842 583 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 MAN1A1P33908 653 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 DLSTP36957 453 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 STK19P49842 368 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 THOP1P52888 689 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 TNNC1P63316 161 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 FOXD4Q12950 439 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 ARHGEF7Q14155 803 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 HLTFQ14527 1009 aaKnown RBP eCLIP6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 DUOXA2Q1HG44 320 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 WDR72Q3MJ13 1102 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 PLEKHN1Q494U1 663 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 CRB2Q5IJ48 1285 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 HYIQ5T013 277 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 KIAA1161Q6NSJ0 714 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 CEACAM20Q6UY09 585 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms