RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 FARP1Q9Y4F1 1045 aaPredicted RBP20.63■□□□□ 0.89
TSPAN3-207ENST00000559494 OTOGLQ3ZCN5 2332 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 EP300Q09472 2414 aaPredicted RBP20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 APOL1O14791 398 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 GSRP00390 522 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 GARSP41250 739 aaKnown RBP20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 RECQLP46063 649 aaPredicted RBP20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 CCNHP51946 323 aaPredicted RBP20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 ADCY2Q08462 1091 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 LPAL2Q16609 132 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 ARSIQ5FYB1 569 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 ATXN7L2Q5T6C5 722 aaPredicted RBP20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 NPNTQ6UXI9 565 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 DSG4Q86SJ6 1040 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 TMIEQ8NEW7 156 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 OR2AP1Q8NGE2 309 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 NKD2Q969F2 451 aaPredicted RBP20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 SPACA7Q96KW9 195 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 HEPHQ9BQS7 1158 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 SERGEFQ9UGK8 458 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 SCML1Q9UN30 329 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 WASF2Q9Y6W5 498 aa20.62■□□□□ 0.89
TSPAN3-207ENST00000559494 hCG_1818297A0A087WSY0 165 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 DDX3YO15523 660 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 ADH1BP00325 375 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 ZFXP17010 805 aaPredicted RBP20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 C5AR1P21730 350 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 CD6P30203 668 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 GKP32189 559 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 RWDD2BP57060 319 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 RHOAP61586 193 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 SNRPD1P62314 119 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 SLC10A7Q0GE19 358 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 MYLK3Q32MK0 819 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 TFDP3Q5H9I0 405 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 KAZNQ674X7 775 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 FAM124AQ86V42 546 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 ATPAF2Q8N5M1 289 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 AADATQ8N5Z0 425 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 OR6K2Q8NGY2 324 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 LRRN4Q8WUT4 740 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 TOE1Q96GM8 510 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 RBM41Q96IZ5 413 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 ZNF599Q96NL3 588 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 FBXL12Q9NXK8 326 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 IL36AQ9UHA7 158 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 HEY1Q9Y5J3 304 aa20.61■□□□□ 0.89
TSPAN3-207ENST00000559494 A0A1W2PP55 124 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 PLK4O00444 970 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 MAP3K13O43283 966 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 CST8O60676 142 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 LEFTY1O75610 366 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 POP4O95707 220 aaKnown RBP20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 LMNAP02545 664 aaKnown RBP20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 PYGMP11217 842 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 OXTRP30559 389 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 DRD3P35462 400 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 COPS2P61201 443 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 DYNLT1P63172 113 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 TFDP2Q14188 446 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 RFTN1Q14699 578 aaPredicted RBP20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 POM121L1PQ3SYA9 428 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 TTC31Q49AM3 519 aaPredicted RBP20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 FAM46CQ5VWP2 391 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 SLC36A4Q6YBV0 504 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 USP30Q70CQ3 517 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 C11orf74Q86VG3 221 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 CCDC50Q8IVM0 306 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 REXO1L1PQ8IX06 675 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 RYBPQ8N488 228 aaPredicted RBP20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 HDDC3Q8N4P3 179 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 TSEN2Q8NCE0 465 aaKnown RBP20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 GANCQ8TET4 914 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 HES6Q96HZ4 224 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 TSGA13Q96PP4 275 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 NEUROG2Q9H2A3 272 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 EVLQ9UI08 416 aaPredicted RBP20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 SMG5Q9UPR3 1016 aaKnown RBP20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 PTPRZ1P23471 2315 aaPredicted RBP20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 FRYLO94915 3013 aa20.6■□□□□ 0.89
TSPAN3-207ENST00000559494 CEP192Q8TEP8 1941 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 MIF4GDA9UHW6 222 aaKnown RBP20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 C1QTNF3-AMACRE9PGA6 284 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 MUSKO15146 869 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 INSIG1O15503 277 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 PRNPP04156 253 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 MX2P20592 715 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 ACSL1P33121 698 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 RGRP47804 291 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 LBRQ14739 615 aaKnown RBP20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 PPP2R5EQ16537 467 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 TMCO4Q5TGY1 634 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 PMS2CLQ68D20 193 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 AADACL2Q6P093 401 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 TMEFF1Q8IYR6 380 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 DEFB119Q8N690 84 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 GRIN3AQ8TCU5 1115 aa20.59■□□□□ 0.89
TSPAN3-207ENST00000559494 ARRDC3Q96B67 414 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms