RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ALG11Q2TAA5 492 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 EDRF1Q3B7T1 1238 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 TIGD2Q4W5G0 525 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 ERMARDQ5T6L9 678 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 ATG9BQ674R7 924 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 ADALQ6DHV7 355 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 AADACL2Q6P093 401 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF585AQ6P3V2 769 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 IL27RAQ6UWB1 636 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 DHRS13Q6UX07 377 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 IL20RBQ6UXL0 311 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SERPINA13PQ6UXR4 307 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 CLEC17AQ6ZS10 378 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SLFN11Q7Z7L1 901 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 TICAM1Q8IUC6 712 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 CEP97Q8IW35 865 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF713Q8N859 430 aaPredicted RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 EXD3Q8N9H8 876 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 IL17RCQ8NAC3 791 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 AVL9Q8NBF6 648 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 Q8NFD4 153 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 GDPD5Q8WTR4 605 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 PRPF31Q8WWY3 499 aaKnown RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 IP6K1Q92551 441 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 ZKSCAN4Q969J2 545 aaPredicted RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 PGAP3Q96FM1 320 aaPredicted RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 VMP1Q96GC9 406 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 Q96MF0 132 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 JAKMIP1Q96N16 626 aaKnown RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 GCNAQ96QF7 691 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 MACROD1Q9BQ69 325 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SRSF8Q9BRL6 282 aaKnown RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 NUF2Q9BZD4 464 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 EDEM3Q9BZQ6 932 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 CIPCQ9C0C6 399 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 XYLT2Q9H1B5 865 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 CXorf56Q9H5V9 222 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SLITRK6Q9H5Y7 841 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 LTB4R2Q9NPC1 389 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SLC35C2Q9NQQ7 365 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SLC6A13Q9NSD5 602 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SERTAD4Q9NUC0 356 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 DECR2Q9NUI1 292 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 GIMAP4Q9NUV9 329 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SEMA5BQ9P283 1151 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 C5AR2Q9P296 337 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 FBXL17Q9UF56 701 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 NENFQ9UMX5 172 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 A4GNTQ9UNA3 340 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 MTMR6Q9Y217 621 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 DTX4Q9Y2E6 619 aa3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SIRT4Q9Y6E7 314 aaPredicted RBP3.31□□□□□ -1.88
TRAV28-201ENST00000557548 SPATA31A1Q5TZJ5 1347 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ADGRF5Q8IZF2 1346 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 TARSL2A2RTX5 802 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 OTOL1A6NHN0 477 aaPredicted RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 GLOD5A6NK44 160 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 LINC00473A8K010 186 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 EXOC3O60645 756 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 CSPG5O95196 566 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 IPO7O95373 1038 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 GGPS1O95749 300 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 SERPINC1P01008 464 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 HEXAP06865 529 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 CYP2D6P10635 497 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 EGR2P11161 476 aaPredicted RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 SLC2A4P14672 509 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 SKIV2L2P42285 1042 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 CAPZA2P47755 286 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 GNAQP50148 359 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 BLKP51451 505 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 RAD23AP54725 363 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 MFAP4P55083 255 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 RHAGQ02094 409 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 HNRNPA0Q13151 305 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 SLC14A1Q13336 389 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 RUNX2Q13950 521 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 KPNB1Q14974 876 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 VEPH1Q14D04 833 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 PPP2R5BQ15173 497 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 RNPS1Q15287 305 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ASIC2Q16515 512 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 RPE65Q16518 533 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ME3Q16798 604 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ASTE1Q2TB18 679 aaPredicted RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ANXA2RQ3ZCQ2 193 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 GLE1Q53GS7 698 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 PCID2Q5JVF3 399 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 FAM171A1Q5VUB5 890 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 KIAA1614Q5VZ46 1190 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 KAZNQ674X7 775 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 TXNDC8Q6A555 127 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ANKRD16Q6P6B7 361 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 RANBP10Q6VN20 620 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 NAPRTQ6XQN6 538 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 DCDC5Q6ZRR9 648 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 PRSS45Q7RTY3 260 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 PLPPR4Q7Z2D5 763 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 BCDIN3DQ7Z5W3 292 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 PEG10Q86TG7 708 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms