RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 RPS24P62847 133 aaKnown RBP10.38□□□□□ -0.75
PCCB-213ENST00000475214 GUCY1A3Q02108 690 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 SLC10A7Q0GE19 358 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 NAB1Q13506 487 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 ZNF235Q14590 738 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 EFTUD2Q15029 972 aaKnown RBP eCLIP10.38□□□□□ -0.751e-8■■■■■ 41.2
PCCB-213ENST00000475214 LEXMQ3ZCV2 418 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 ZNF449Q6P9G9 518 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 ZNF783Q6ZMS7 281 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 LEKR1Q6ZMV7 388 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 Q6ZNB5 142 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 HTR3DQ70Z44 454 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 SPRED2Q7Z698 418 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 TRABD2AQ86V40 505 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 SLC26A11Q86WA9 606 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 LRRC6Q86X45 466 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 CCDC117Q8IWD4 279 aaPredicted RBP10.38□□□□□ -0.75
PCCB-213ENST00000475214 SRRM1Q8IYB3 904 aaKnown RBP10.38□□□□□ -0.75
PCCB-213ENST00000475214 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.38□□□□□ -0.75
PCCB-213ENST00000475214 PPM1NQ8N819 430 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 HJURPQ8NCD3 748 aaPredicted RBP10.38□□□□□ -0.75
PCCB-213ENST00000475214 IPMKQ8NFU5 416 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 SPATA22Q8NHS9 363 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 DCAKDQ8WVC6 231 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 SLC44A1Q8WWI5 657 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 WBP2Q969T9 261 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 TTC17Q96AE7 1141 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 CENPTQ96BT3 561 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 TMA16Q96EY4 203 aaKnown RBP10.38□□□□□ -0.75
PCCB-213ENST00000475214 PRICKLE1Q96MT3 831 aaPredicted RBP10.38□□□□□ -0.75
PCCB-213ENST00000475214 SMC6Q96SB8 1091 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 SPON2Q9BUD6 331 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 FICDQ9BVA6 458 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 FSD1LQ9BXM9 530 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 IL22Q9GZX6 179 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 MAN1C1Q9NR34 630 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 VPS45Q9NRW7 570 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 INTS9Q9NV88 658 aaKnown RBP10.38□□□□□ -0.75
PCCB-213ENST00000475214 TBC1D30Q9Y2I9 924 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 DENND4CQ5VZ89 1909 aa10.38□□□□□ -0.75
PCCB-213ENST00000475214 FAM159BA6NKW6 160 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 SOBPA7XYQ1 873 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 H0Y626 953 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 ATP9BO43861 1147 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 TBL1XO60907 577 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 PMPCBO75439 489 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 ALDH1A2O94788 518 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 MT-CYBP00156 380 aaPredicted RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 CHN1P15882 459 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 KCNA5P22460 613 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 IRS1P35568 1242 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 SERPINB9P50453 376 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 EPHA5P54756 1037 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 CRADDP78560 199 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 RFTN1Q14699 578 aaPredicted RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 CRYMQ14894 314 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 GPR158Q5T848 1215 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 ARMC3Q5W041 872 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 RNF219Q5W0B1 726 aaPredicted RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 TTC19Q6DKK2 380 aaPredicted RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 PRPF39Q86UA1 669 aaKnown RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 FAM217AQ8IXS0 508 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 CPXM2Q8N436 756 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 CARNMT1Q8N4J0 409 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 TTC16Q8NEE8 873 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 OR7D4Q8NG98 312 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 IMP4Q96G21 291 aaKnown RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 APOL2Q9BQE5 337 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 LRFN3Q9BTN0 628 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 SLC46A2Q9BY10 475 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 POLR1EQ9GZS1 481 aaKnown RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 MUC3BQ9H195 1237 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 TRABDQ9H4I3 376 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 EPHX3Q9H6B9 360 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 ATP13A1Q9HD20 1204 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 PPANQ9NQ55 473 aaKnown RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 PIH1D1Q9NWS0 290 aaKnown RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 NKIRAS1Q9NYS0 192 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 MOCS1Q9NZB8 636 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 CFAP97Q9P2B7 532 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 UBA2Q9UBT2 640 aaPredicted RBP10.37□□□□□ -0.75
PCCB-213ENST00000475214 SEPT3Q9UH03 358 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 ZMYM5Q9UJ78 669 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 ZNF180Q9UJW8 692 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 RPS6KL1Q9Y6S9 549 aa10.37□□□□□ -0.75
PCCB-213ENST00000475214 A0A0D9SEW6 157 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 FAM237BA0A1B0GVD1 139 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 TMEM120BA0PK00 339 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 SRRM3A6NNA2 597 aaPredicted RBP10.36□□□□□ -0.75
PCCB-213ENST00000475214 GREM1O60565 184 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 RFPL2O75678 378 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 KRT37O76014 449 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 KRT38O76015 456 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 USP1O94782 785 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 LUC7L3O95232 432 aaKnown RBP10.36□□□□□ -0.75
PCCB-213ENST00000475214 C1QAP02745 245 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 MT-ND3P03897 115 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 RHOP08100 348 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 EPCAMP16422 314 aa10.36□□□□□ -0.75
PCCB-213ENST00000475214 GJA1P17302 382 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms