RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 BMP1P13497 986 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 POLR2EP19388 210 aaKnown RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 PTPN3P26045 913 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 PEX19P40855 299 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 PTGIRP43119 386 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 STK19P49842 368 aaPredicted RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 LMNB2Q03252 620 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 HNRNPDQ14103 355 aaKnown RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 NAA30Q147X3 362 aaPredicted RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 PPP1R7Q15435 360 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 MBLAC2Q68D91 279 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 C16orf87Q6PH81 154 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 MAATS1Q7Z4T9 603 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 JAMLQ86YT9 394 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF567Q8N184 647 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 SORCS1Q8WY21 1168 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 MAML1Q92585 1016 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 RTP4Q96DX8 246 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 ASB2Q96Q27 587 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 PNKPQ96T60 521 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 FERMT1Q9BQL6 677 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 TRIM51Q9BSJ1 452 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 UTP6Q9NYH9 597 aaKnown RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 DUSP12Q9UNI6 340 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 TTLL3Q9Y4R7 772 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 TTC28Q96AY4 2481 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 MUC22E2RYF6 1773 aaPredicted RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 TBC1D3BA6NDS4 549 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 ZSCAN5CA6NGD5 496 aaPredicted RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 C19orf67A6NJJ6 358 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 MTSS1O43312 755 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 KAT7O95251 611 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 VPS41P49754 854 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 ECT2LQ008S8 904 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 SLC7A5Q01650 507 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 PFKPQ01813 784 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 DMC1Q14565 340 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 LBRQ14739 615 aaKnown RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 P3H1Q32P28 736 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 TEX44Q53QW1 395 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 ANKRD20A2Q5SQ80 823 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 TMCO4Q5TGY1 634 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 ANKRD20A1Q5TYW2 823 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 MARC1Q5VT66 337 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 ANKRD20A3Q5VUR7 823 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 PHC3Q8NDX5 983 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 CYB5D2Q8WUJ1 264 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 NSMCE1Q8WV22 266 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 FATE1Q969F0 183 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 P2RY13Q9BPV8 354 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 HINFPQ9BQA5 517 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 YIPF2Q9BWQ6 316 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 SLC2A4RGQ9NR83 387 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 UBA2Q9UBT2 640 aaPredicted RBP6.98□□□□□ -1.29
SCAF4-204ENST00000467731 SORCS3Q9UPU3 1222 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 NEU2Q9Y3R4 380 aa6.98□□□□□ -1.29
SCAF4-204ENST00000467731 A0A0A0MRY4 1105 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ANTXRLA6NF34 631 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 C5orf60A6NFR6 353 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 EFCAB8A8MWE9 144 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 K7ERQ8 282 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ZSCAN9O15535 394 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 SMAD6O43541 496 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 STK10O94804 968 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 TMCC1O94876 653 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 KRT14P02533 472 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 HLA-DQB2P05538 268 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 MMP13P45452 471 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 GALK1P51570 392 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 RENBPP51606 427 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 IFI35P80217 286 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 SULT2A1Q06520 285 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ARMC3Q5W041 872 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 RETSATQ6NUM9 610 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 PID1Q7Z2X4 250 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 RALGPS2Q86X27 583 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 TAB3Q8N5C8 712 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 CNTD1Q8N815 330 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ATP11CQ8NB49 1132 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 TSEN2Q8NCE0 465 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 WFIKKN2Q8TEU8 576 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 TTC17Q96AE7 1141 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 SPATA13Q96N96 652 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF599Q96NL3 588 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 IL12RB2Q99665 862 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 C8orf33Q9H7E9 229 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 PCDH9Q9HC56 1237 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 NT5MQ9NPB1 228 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 RBM22Q9NW64 420 aaKnown RBP eCLIP6.97□□□□□ -1.291e-6■■■■■ 34.8
SCAF4-204ENST00000467731 ELOVL2Q9NXB9 296 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 KLHL8Q9P2G9 620 aaPredicted RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 DMGDHQ9UI17 866 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 MCM8Q9UJA3 840 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 SLC25A13Q9UJS0 675 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 HS3ST2Q9Y278 367 aa6.97□□□□□ -1.29
SCAF4-204ENST00000467731 FCF1Q9Y324 198 aaKnown RBP6.97□□□□□ -1.29
SCAF4-204ENST00000467731 DMDP11532 3685 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms