RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 MTAPQ13126 283 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 CAMK2GQ13555 558 aaPredicted RBP16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 ZNF776Q68DI1 518 aaPredicted RBP16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 ITPRIPL1Q6GPH6 555 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 PGBD3Q8N328 593 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 OR2T3Q8NH03 318 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 FRS2Q8WU20 508 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 MYO19Q96H55 970 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 CAPZA3Q96KX2 299 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 PPP1R2P1Q96PQ5 205 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 HEPHQ9BQS7 1158 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 HERPUD2Q9BSE4 406 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 TM6SF2Q9BZW4 377 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 POLR1EQ9GZS1 481 aaKnown RBP16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 TNKS2Q9H2K2 1166 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 NT5MQ9NPB1 228 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 ZDHHC4Q9NPG8 344 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 HECAQ9UBI9 543 aaPredicted RBP16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 TTLL3Q9Y4R7 772 aa16.8■□□□□ 0.28
CTDSPL-204ENST00000435525 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 TCRBV7S2A1N4TA0A589 114 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 TCRBV21S2A2A0A5A6 115 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 KCNK1O00180 336 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 KCNN4O15554 427 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 PI15O43692 258 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 LIASO43766 372 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 ADAM23O75077 832 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 SIN3BO75182 1162 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 URI1O94763 535 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 APBB3O95704 486 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 ACADMP11310 421 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 AVPR2P30518 371 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 TNNT3P45378 269 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 AP1S1P61966 158 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 ZBTB16Q05516 673 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 CKAP4Q07065 602 aaKnown RBP16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 SLC10A7Q0GE19 358 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 CYTH1Q15438 398 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 CFAP58Q5T655 872 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 DRICH1Q6PGQ1 229 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 GSTA5Q7RTV2 222 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 TEX26Q8N6G2 289 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 ZNF366Q8N895 744 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 DTWD2Q8NBA8 298 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 SLC35B2Q8TB61 432 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 C1orf54Q8WWF1 131 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 PRCCQ92733 491 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 NKD2Q969F2 451 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 LRRC45Q96CN5 670 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 PPP1R16AQ96I34 528 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 LRIG1Q96JA1 1093 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 MS4A14Q96JA4 679 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 RUNDC3BQ96NL0 473 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 SCUBE2Q9NQ36 999 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 PRSS16Q9NQE7 514 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 DYRK4Q9NR20 520 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 DLGAP2Q9P1A6 1054 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 KLHL8Q9P2G9 620 aaPredicted RBP16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 HCN2Q9UL51 889 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 SCML1Q9UN30 329 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 MYOFQ9NZM1 2061 aa16.79■□□□□ 0.28
CTDSPL-204ENST00000435525 TTC28Q96AY4 2481 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 SPTBN5Q9NRC6 3674 aaKnown RBP16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 KIAA1549LQ6ZVL6 1849 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 FAM86C2PA6NEL3 165 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 ESPNB1AK53 854 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 RNF103O00237 685 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 ZNF185O15231 689 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 PAPSS2O95340 614 aaPredicted RBP16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 CD160O95971 181 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 ADH1BP00325 375 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 RBL1P28749 1068 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 CHRNA3P32297 505 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 SCNN1BP51168 640 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 MYLK3Q32MK0 819 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 TTC31Q49AM3 519 aaPredicted RBP16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 TEX44Q53QW1 395 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 C9orf64Q5T6V5 341 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 SRLQ86TD4 932 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 C1orf210Q8IVY1 113 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 STK40Q8N2I9 435 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 CCDC89Q8N998 374 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 OR2A12Q8NGT7 310 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 GRK7Q8WTQ7 553 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 PTPRN2Q92932 1015 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 MAGOHBQ96A72 148 aaKnown RBP16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 TUBGCP5Q96RT8 1024 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 IL12RB2Q99665 862 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 FAM118BQ9BPY3 351 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 OSBPL1AQ9BXW6 950 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 ATP13A3Q9H7F0 1226 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 LHX3Q9UBR4 397 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 IL36AQ9UHA7 158 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 DNPEPQ9ULA0 475 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 DRG1Q9Y295 367 aaKnown RBP16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 R3HDM2Q9Y2K5 976 aaKnown RBP16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 NCOR1O75376 2440 aa16.78■□□□□ 0.28
CTDSPL-204ENST00000435525 DOCK4Q8N1I0 1966 aa16.77■□□□□ 0.28
CTDSPL-204ENST00000435525 A0A1W2PQF6 199 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms